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ZNF322 (zinc finger protein 322)

Identity

Other aliasHCG12
ZNF322A
ZNF388
ZNF489
HGNC (Hugo) ZNF322
LocusID (NCBI) 79692
Atlas_Id 57218
Location 6p22.2  [Link to chromosome band 6p22]
Location_base_pair Starts at 26634383 and ends at 26659752 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF322 (6p22.2) / PPIL6 (6q21)ZNF322 (6p22.2) / SLC39A9 (14q24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(6;6)(p22;q21) ZNF322/PPIL6


External links

Nomenclature
HGNC (Hugo)ZNF322   23640
Cards
Entrez_Gene (NCBI)ZNF322  79692  zinc finger protein 322
AliasesHCG12; ZNF322A; ZNF388; ZNF489
GeneCards (Weizmann)ZNF322
Ensembl hg19 (Hinxton)ENSG00000181315 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000181315 [Gene_View]  ENSG00000181315 [Sequence]  chr6:26634383-26659752 [Contig_View]  ZNF322 [Vega]
ICGC DataPortalENSG00000181315
TCGA cBioPortalZNF322
AceView (NCBI)ZNF322
Genatlas (Paris)ZNF322
WikiGenes79692
SOURCE (Princeton)ZNF322
Genetics Home Reference (NIH)ZNF322
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF322  -     chr6:26634383-26659752 -  6p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF322  -     6p22.2   [Description]    (hg19-Feb_2009)
EnsemblZNF322 - 6p22.2 [CytoView hg19]  ZNF322 - 6p22.2 [CytoView hg38]
Mapping of homologs : NCBIZNF322 [Mapview hg19]  ZNF322 [Mapview hg38]
OMIM610847   
Gene and transcription
Genbank (Entrez)AK027046 AK290038 AY376736 BC050425 BC074772
RefSeq transcript (Entrez)NM_001242797 NM_001242798 NM_001242799 NM_024639
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF322
Cluster EST : UnigeneHs.709963 [ NCBI ]
CGAP (NCI)Hs.709963
Alternative Splicing GalleryENSG00000181315
Gene ExpressionZNF322 [ NCBI-GEO ]   ZNF322 [ EBI - ARRAY_EXPRESS ]   ZNF322 [ SEEK ]   ZNF322 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF322 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79692
GTEX Portal (Tissue expression)ZNF322
Human Protein AtlasENSG00000181315-ZNF322 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6U7Q0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6U7Q0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6U7Q0
Splice isoforms : SwissVarQ6U7Q0
PhosPhoSitePlusQ6U7Q0
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF322
DMDM Disease mutations79692
Blocks (Seattle)ZNF322
SuperfamilyQ6U7Q0
Human Protein Atlas [tissue]ENSG00000181315-ZNF322 [tissue]
Peptide AtlasQ6U7Q0
IPIIPI00419855   IPI00946291   
Protein Interaction databases
DIP (DOE-UCLA)Q6U7Q0
IntAct (EBI)Q6U7Q0
FunCoupENSG00000181315
BioGRIDZNF322
STRING (EMBL)ZNF322
ZODIACZNF322
Ontologies - Pathways
QuickGOQ6U7Q0
Ontology : AmiGODNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  centrosome  cytosol  regulation of transcription by RNA polymerase II  enhancer binding  metal ion binding  positive regulation of stem cell population maintenance  
Ontology : EGO-EBIDNA-binding transcription factor activity, RNA polymerase II-specific  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  centrosome  cytosol  regulation of transcription by RNA polymerase II  enhancer binding  metal ion binding  positive regulation of stem cell population maintenance  
NDEx NetworkZNF322
Atlas of Cancer Signalling NetworkZNF322
Wikipedia pathwaysZNF322
Orthology - Evolution
OrthoDB79692
GeneTree (enSembl)ENSG00000181315
Phylogenetic Trees/Animal Genes : TreeFamZNF322
HOVERGENQ6U7Q0
HOGENOMQ6U7Q0
Homologs : HomoloGeneZNF322
Homology/Alignments : Family Browser (UCSC)ZNF322
Gene fusions - Rearrangements
Fusion : QuiverZNF322
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF322 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF322
dbVarZNF322
ClinVarZNF322
1000_GenomesZNF322 
Exome Variant ServerZNF322
ExAC (Exome Aggregation Consortium)ENSG00000181315
GNOMAD BrowserENSG00000181315
Varsome BrowserZNF322
Genetic variants : HAPMAP79692
Genomic Variants (DGV)ZNF322 [DGVbeta]
DECIPHERZNF322 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF322 
Mutations
ICGC Data PortalZNF322 
TCGA Data PortalZNF322 
Broad Tumor PortalZNF322
OASIS PortalZNF322 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF322
BioMutasearch ZNF322
DgiDB (Drug Gene Interaction Database)ZNF322
DoCM (Curated mutations)ZNF322 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF322 (select a term)
intoGenZNF322
Cancer3DZNF322(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610847   
Orphanet
DisGeNETZNF322
MedgenZNF322
Genetic Testing Registry ZNF322
NextProtQ6U7Q0 [Medical]
TSGene79692
GENETestsZNF322
Target ValidationZNF322
Huge Navigator ZNF322 [HugePedia]
snp3D : Map Gene to Disease79692
BioCentury BCIQZNF322
ClinGenZNF322
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79692
Chemical/Pharm GKB GenePA134861342
Clinical trialZNF322
Miscellaneous
canSAR (ICR)ZNF322 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF322
EVEXZNF322
GoPubMedZNF322
iHOPZNF322
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:51:26 CET 2018

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