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ZNF337 (zinc finger protein 337)

Identity

Alias_symbol (synonym)dJ694B14.1
Other alias-
HGNC (Hugo) ZNF337
LocusID (NCBI) 26152
Atlas_Id 76105
Location 20p11.21  [Link to chromosome band 20p11]
Location_base_pair Starts at 25673195 and ends at 25686939 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
APMAP (20p11.21) / ZNF337 (20p11.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF337   15809
Cards
Entrez_Gene (NCBI)ZNF337  26152  zinc finger protein 337
Aliases
GeneCards (Weizmann)ZNF337
Ensembl hg19 (Hinxton)ENSG00000130684 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130684 [Gene_View]  chr20:25673195-25686939 [Contig_View]  ZNF337 [Vega]
ICGC DataPortalENSG00000130684
TCGA cBioPortalZNF337
AceView (NCBI)ZNF337
Genatlas (Paris)ZNF337
WikiGenes26152
SOURCE (Princeton)ZNF337
Genetics Home Reference (NIH)ZNF337
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF337  -     chr20:25673195-25686939 -  20p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF337  -     20p11.21   [Description]    (hg19-Feb_2009)
EnsemblZNF337 - 20p11.21 [CytoView hg19]  ZNF337 - 20p11.21 [CytoView hg38]
Mapping of homologs : NCBIZNF337 [Mapview hg19]  ZNF337 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056184 AK056466 AK125455 AK291235 AK299811
RefSeq transcript (Entrez)NM_001290261 NM_015655
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF337
Cluster EST : UnigeneHs.661684 [ NCBI ]
CGAP (NCI)Hs.661684
Alternative Splicing GalleryENSG00000130684
Gene ExpressionZNF337 [ NCBI-GEO ]   ZNF337 [ EBI - ARRAY_EXPRESS ]   ZNF337 [ SEEK ]   ZNF337 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF337 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26152
GTEX Portal (Tissue expression)ZNF337
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y3M9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y3M9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y3M9
Splice isoforms : SwissVarQ9Y3M9
PhosPhoSitePlusQ9Y3M9
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF337
DMDM Disease mutations26152
Blocks (Seattle)ZNF337
SuperfamilyQ9Y3M9
Human Protein AtlasENSG00000130684
Peptide AtlasQ9Y3M9
HPRD15779
IPIIPI00000110   IPI01010543   IPI00843812   IPI00748198   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y3M9
IntAct (EBI)Q9Y3M9
FunCoupENSG00000130684
BioGRIDZNF337
STRING (EMBL)ZNF337
ZODIACZNF337
Ontologies - Pathways
QuickGOQ9Y3M9
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF337
Atlas of Cancer Signalling NetworkZNF337
Wikipedia pathwaysZNF337
Orthology - Evolution
OrthoDB26152
GeneTree (enSembl)ENSG00000130684
Phylogenetic Trees/Animal Genes : TreeFamZNF337
HOVERGENQ9Y3M9
HOGENOMQ9Y3M9
Homologs : HomoloGeneZNF337
Homology/Alignments : Family Browser (UCSC)ZNF337
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF337 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF337
dbVarZNF337
ClinVarZNF337
1000_GenomesZNF337 
Exome Variant ServerZNF337
ExAC (Exome Aggregation Consortium)ZNF337 (select the gene name)
Genetic variants : HAPMAP26152
Genomic Variants (DGV)ZNF337 [DGVbeta]
DECIPHERZNF337 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF337 
Mutations
ICGC Data PortalZNF337 
TCGA Data PortalZNF337 
Broad Tumor PortalZNF337
OASIS PortalZNF337 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF337  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF337
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF337
DgiDB (Drug Gene Interaction Database)ZNF337
DoCM (Curated mutations)ZNF337 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF337 (select a term)
intoGenZNF337
Cancer3DZNF337(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF337
Genetic Testing Registry ZNF337
NextProtQ9Y3M9 [Medical]
TSGene26152
GENETestsZNF337
Target ValidationZNF337
Huge Navigator ZNF337 [HugePedia]
snp3D : Map Gene to Disease26152
BioCentury BCIQZNF337
ClinGenZNF337
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26152
Chemical/Pharm GKB GenePA38043
Clinical trialZNF337
Miscellaneous
canSAR (ICR)ZNF337 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF337
EVEXZNF337
GoPubMedZNF337
iHOPZNF337
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:39 CEST 2017

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