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ZNF33A (zinc finger protein 33A)

Identity

Alias (NCBI)KOX2
KOX31
KOX5
NF11A
ZNF11
ZNF11A
ZNF33
ZZAPK
HGNC (Hugo) ZNF33A
HGNC Alias symbKOX5
KOX31
KIAA0065
FLJ23404
ZZAPK
HGNC Alias namezinc finger and ZAK associated protein with KRAB domain
HGNC Previous nameZNF33
 ZNF11A
HGNC Previous namezinc finger protein 33a (KOX 31)
 zinc finger protein 11A
LocusID (NCBI) 7581
Atlas_Id 76106
Location 10p11.1  [Link to chromosome band 10p11]
Location_base_pair Starts at 38010675 and ends at 38060055 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF33A (10p11.1) / PARD3 (10p11.22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF33A   13096
Cards
Entrez_Gene (NCBI)ZNF33A    zinc finger protein 33A
AliasesKOX2; KOX31; KOX5; NF11A; 
ZNF11; ZNF11A; ZNF33; ZZAPK
GeneCards (Weizmann)ZNF33A
Ensembl hg19 (Hinxton)ENSG00000189180 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189180 [Gene_View]  ENSG00000189180 [Sequence]  chr10:38010675-38060055 [Contig_View]  ZNF33A [Vega]
ICGC DataPortalENSG00000189180
TCGA cBioPortalZNF33A
AceView (NCBI)ZNF33A
Genatlas (Paris)ZNF33A
SOURCE (Princeton)ZNF33A
Genetics Home Reference (NIH)ZNF33A
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF33A  -     chr10:38010675-38060055 +  10p11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF33A  -     10p11.1   [Description]    (hg19-Feb_2009)
GoldenPathZNF33A - 10p11.1 [CytoView hg19]  ZNF33A - 10p11.1 [CytoView hg38]
ImmunoBaseENSG00000189180
Genome Data Viewer NCBIZNF33A [Mapview hg19]  
OMIM194521   
Gene and transcription
Genbank (Entrez)AF063599 AF086531 AI300433 AK027057 AK292844
RefSeq transcript (Entrez)NM_001278170 NM_001278171 NM_001278173 NM_001278174 NM_001278175 NM_001278176 NM_001278177 NM_001278178 NM_001278179 NM_001324175 NM_001324176 NM_001324177 NM_001324178 NM_006954 NM_006974
Consensus coding sequences : CCDS (NCBI)ZNF33A
Gene ExpressionZNF33A [ NCBI-GEO ]   ZNF33A [ EBI - ARRAY_EXPRESS ]   ZNF33A [ SEEK ]   ZNF33A [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF33A [ Firebrowse - Broad ]
GenevisibleExpression of ZNF33A in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7581
GTEX Portal (Tissue expression)ZNF33A
Human Protein AtlasENSG00000189180-ZNF33A [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ06730   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ06730  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ06730
PhosPhoSitePlusQ06730
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF33A
SuperfamilyQ06730
AlphaFold pdb e-kbQ06730   
Human Protein Atlas [tissue]ENSG00000189180-ZNF33A [tissue]
HPRD11710
Protein Interaction databases
DIP (DOE-UCLA)Q06730
IntAct (EBI)Q06730
BioGRIDZNF33A
STRING (EMBL)ZNF33A
ZODIACZNF33A
Ontologies - Pathways
QuickGOQ06730
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  DNA-binding transcription factor activity  nucleus  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  positive regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  DNA-binding transcription factor activity  nucleus  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  positive regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF33A
Atlas of Cancer Signalling NetworkZNF33A
Wikipedia pathwaysZNF33A
Orthology - Evolution
OrthoDB7581
GeneTree (enSembl)ENSG00000189180
Phylogenetic Trees/Animal Genes : TreeFamZNF33A
Homologs : HomoloGeneZNF33A
Homology/Alignments : Family Browser (UCSC)ZNF33A
Gene fusions - Rearrangements
Fusion : QuiverZNF33A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF33A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF33A
dbVarZNF33A
ClinVarZNF33A
MonarchZNF33A
1000_GenomesZNF33A 
Exome Variant ServerZNF33A
GNOMAD BrowserENSG00000189180
Varsome BrowserZNF33A
ACMGZNF33A variants
VarityQ06730
Genomic Variants (DGV)ZNF33A [DGVbeta]
DECIPHERZNF33A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF33A 
Mutations
ICGC Data PortalZNF33A 
TCGA Data PortalZNF33A 
Broad Tumor PortalZNF33A
OASIS PortalZNF33A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF33A  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF33A
Mutations and Diseases : HGMDZNF33A
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF33A
DgiDB (Drug Gene Interaction Database)ZNF33A
DoCM (Curated mutations)ZNF33A
CIViC (Clinical Interpretations of Variants in Cancer)ZNF33A
Cancer3DZNF33A
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM194521   
Orphanet
DisGeNETZNF33A
MedgenZNF33A
Genetic Testing Registry ZNF33A
NextProtQ06730 [Medical]
GENETestsZNF33A
Target ValidationZNF33A
Huge Navigator ZNF33A [HugePedia]
ClinGenZNF33A
Clinical trials, drugs, therapy
MyCancerGenomeZNF33A
Protein Interactions : CTDZNF33A
Pharm GKB GenePA37671
PharosQ06730
Clinical trialZNF33A
Miscellaneous
canSAR (ICR)ZNF33A
HarmonizomeZNF33A
DataMed IndexZNF33A
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF33A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:29:33 CEST 2021

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