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ZNF345 (zinc finger protein 345)

Identity

Alias (NCBI)HZF10
HGNC (Hugo) ZNF345
HGNC Alias symbHZF10
LocusID (NCBI) 25850
Atlas_Id 76113
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 36850358 and ends at 36879575 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF345 (19q13.12) / HSF2BP (21q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF345   16367
Cards
Entrez_Gene (NCBI)ZNF345    zinc finger protein 345
AliasesHZF10
GeneCards (Weizmann)ZNF345
Ensembl hg19 (Hinxton)ENSG00000251247 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251247 [Gene_View]  ENSG00000251247 [Sequence]  chr19:36850358-36879575 [Contig_View]  ZNF345 [Vega]
ICGC DataPortalENSG00000251247
TCGA cBioPortalZNF345
AceView (NCBI)ZNF345
Genatlas (Paris)ZNF345
SOURCE (Princeton)ZNF345
Genetics Home Reference (NIH)ZNF345
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF345  -     chr19:36850358-36879575 +  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF345  -     19q13.12   [Description]    (hg19-Feb_2009)
GoldenPathZNF345 - 19q13.12 [CytoView hg19]  ZNF345 - 19q13.12 [CytoView hg38]
ImmunoBaseENSG00000251247
Genome Data Viewer NCBIZNF345 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK094146 AK297516 AK315069 BC010386 BC032863
RefSeq transcript (Entrez)NM_001242472 NM_001242474 NM_001242475 NM_001242476 NM_003419
Consensus coding sequences : CCDS (NCBI)ZNF345
Gene ExpressionZNF345 [ NCBI-GEO ]   ZNF345 [ EBI - ARRAY_EXPRESS ]   ZNF345 [ SEEK ]   ZNF345 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF345 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF345 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25850
GTEX Portal (Tissue expression)ZNF345
Human Protein AtlasENSG00000251247-ZNF345 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14585   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14585  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14585
PhosPhoSitePlusQ14585
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF345
SuperfamilyQ14585
AlphaFold pdb e-kbQ14585   
Human Protein Atlas [tissue]ENSG00000251247-ZNF345 [tissue]
HPRD10330
Protein Interaction databases
DIP (DOE-UCLA)Q14585
IntAct (EBI)Q14585
BioGRIDZNF345
STRING (EMBL)ZNF345
ZODIACZNF345
Ontologies - Pathways
QuickGOQ14585
Ontology : AmiGOnegative regulation of transcription by RNA polymerase II  RNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  protein binding  nucleus  regulation of transcription by RNA polymerase II  regulation of transcription by RNA polymerase III  transcription by RNA polymerase II  transcription by RNA polymerase III  positive regulation of transcription by RNA polymerase II  metal ion binding  sequence-specific double-stranded DNA binding  
Ontology : EGO-EBInegative regulation of transcription by RNA polymerase II  RNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription activator activity, RNA polymerase II-specific  protein binding  nucleus  regulation of transcription by RNA polymerase II  regulation of transcription by RNA polymerase III  transcription by RNA polymerase II  transcription by RNA polymerase III  positive regulation of transcription by RNA polymerase II  metal ion binding  sequence-specific double-stranded DNA binding  
NDEx NetworkZNF345
Atlas of Cancer Signalling NetworkZNF345
Wikipedia pathwaysZNF345
Orthology - Evolution
OrthoDB25850
GeneTree (enSembl)ENSG00000251247
Phylogenetic Trees/Animal Genes : TreeFamZNF345
Homologs : HomoloGeneZNF345
Homology/Alignments : Family Browser (UCSC)ZNF345
Gene fusions - Rearrangements
Fusion : QuiverZNF345
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF345 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF345
dbVarZNF345
ClinVarZNF345
MonarchZNF345
1000_GenomesZNF345 
Exome Variant ServerZNF345
GNOMAD BrowserENSG00000251247
Varsome BrowserZNF345
ACMGZNF345 variants
VarityQ14585
Genomic Variants (DGV)ZNF345 [DGVbeta]
DECIPHERZNF345 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF345 
Mutations
ICGC Data PortalZNF345 
TCGA Data PortalZNF345 
Broad Tumor PortalZNF345
OASIS PortalZNF345 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF345  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF345
Mutations and Diseases : HGMDZNF345
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF345
DgiDB (Drug Gene Interaction Database)ZNF345
DoCM (Curated mutations)ZNF345
CIViC (Clinical Interpretations of Variants in Cancer)ZNF345
Cancer3DZNF345
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF345
MedgenZNF345
Genetic Testing Registry ZNF345
NextProtQ14585 [Medical]
GENETestsZNF345
Target ValidationZNF345
Huge Navigator ZNF345 [HugePedia]
ClinGenZNF345
Clinical trials, drugs, therapy
MyCancerGenomeZNF345
Protein Interactions : CTDZNF345
Pharm GKB GenePA38128
PharosQ14585
Clinical trialZNF345
Miscellaneous
canSAR (ICR)ZNF345
HarmonizomeZNF345
DataMed IndexZNF345
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF345
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:29:35 CEST 2021

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