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ZNF347 (zinc finger protein 347)

Identity

Alias_symbol (synonym)ZNF1111
Other alias
HGNC (Hugo) ZNF347
LocusID (NCBI) 84671
Atlas_Id 76115
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53641957 and ends at 53662313 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
FKBP5 (6p21.31) / ZNF347 (19q13.42)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF347   16447
Cards
Entrez_Gene (NCBI)ZNF347  84671  zinc finger protein 347
AliasesZNF1111
GeneCards (Weizmann)ZNF347
Ensembl hg19 (Hinxton)ENSG00000197937 [Gene_View]  chr19:53641957-53662313 [Contig_View]  ZNF347 [Vega]
Ensembl hg38 (Hinxton)ENSG00000197937 [Gene_View]  chr19:53641957-53662313 [Contig_View]  ZNF347 [Vega]
ICGC DataPortalENSG00000197937
TCGA cBioPortalZNF347
AceView (NCBI)ZNF347
Genatlas (Paris)ZNF347
WikiGenes84671
SOURCE (Princeton)ZNF347
Genetics Home Reference (NIH)ZNF347
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF347  -     chr19:53641957-53662313 -  19q13.42   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF347  -     19q13.42   [Description]    (hg38-Dec_2013)
EnsemblZNF347 - 19q13.42 [CytoView hg19]  ZNF347 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIZNF347 [Mapview hg19]  ZNF347 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA776564 AA978292 AI366675 AK095593 AK096623
RefSeq transcript (Entrez)NM_001172674 NM_001172675 NM_032584
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF347
Cluster EST : UnigeneHs.467239 [ NCBI ]
CGAP (NCI)Hs.467239
Alternative Splicing GalleryENSG00000197937
Gene ExpressionZNF347 [ NCBI-GEO ]   ZNF347 [ EBI - ARRAY_EXPRESS ]   ZNF347 [ SEEK ]   ZNF347 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF347 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84671
GTEX Portal (Tissue expression)ZNF347
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96SE7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96SE7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96SE7
Splice isoforms : SwissVarQ96SE7
PhosPhoSitePlusQ96SE7
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF347
DMDM Disease mutations84671
Blocks (Seattle)ZNF347
PDB (SRS)2EMA    2EMP    2EN4    2ENE    2ENF    2EOE    2EOW    2EQ0    2EQ1    2EQ2    2EQ3    2YTI    2YTK    2YTN    2YTR    2YU8   
PDB (PDBSum)2EMA    2EMP    2EN4    2ENE    2ENF    2EOE    2EOW    2EQ0    2EQ1    2EQ2    2EQ3    2YTI    2YTK    2YTN    2YTR    2YU8   
PDB (IMB)2EMA    2EMP    2EN4    2ENE    2ENF    2EOE    2EOW    2EQ0    2EQ1    2EQ2    2EQ3    2YTI    2YTK    2YTN    2YTR    2YU8   
PDB (RSDB)2EMA    2EMP    2EN4    2ENE    2ENF    2EOE    2EOW    2EQ0    2EQ1    2EQ2    2EQ3    2YTI    2YTK    2YTN    2YTR    2YU8   
Structural Biology KnowledgeBase2EMA    2EMP    2EN4    2ENE    2ENF    2EOE    2EOW    2EQ0    2EQ1    2EQ2    2EQ3    2YTI    2YTK    2YTN    2YTR    2YU8   
SCOP (Structural Classification of Proteins)2EMA    2EMP    2EN4    2ENE    2ENF    2EOE    2EOW    2EQ0    2EQ1    2EQ2    2EQ3    2YTI    2YTK    2YTN    2YTR    2YU8   
CATH (Classification of proteins structures)2EMA    2EMP    2EN4    2ENE    2ENF    2EOE    2EOW    2EQ0    2EQ1    2EQ2    2EQ3    2YTI    2YTK    2YTN    2YTR    2YU8   
SuperfamilyQ96SE7
Human Protein AtlasENSG00000197937
Peptide AtlasQ96SE7
HPRD15783
IPIIPI00045605   IPI01010001   IPI00642859   
Protein Interaction databases
DIP (DOE-UCLA)Q96SE7
IntAct (EBI)Q96SE7
FunCoupENSG00000197937
BioGRIDZNF347
STRING (EMBL)ZNF347
ZODIACZNF347
Ontologies - Pathways
QuickGOQ96SE7
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF347
Atlas of Cancer Signalling NetworkZNF347
Wikipedia pathwaysZNF347
Orthology - Evolution
OrthoDB84671
GeneTree (enSembl)ENSG00000197937
Phylogenetic Trees/Animal Genes : TreeFamZNF347
HOVERGENQ96SE7
HOGENOMQ96SE7
Homologs : HomoloGeneZNF347
Homology/Alignments : Family Browser (UCSC)ZNF347
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF347 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF347
dbVarZNF347
ClinVarZNF347
1000_GenomesZNF347 
Exome Variant ServerZNF347
ExAC (Exome Aggregation Consortium)ZNF347 (select the gene name)
Genetic variants : HAPMAP84671
Genomic Variants (DGV)ZNF347 [DGVbeta]
DECIPHER (Syndromes)19:53641957-53662313  ENSG00000197937
CONAN: Copy Number AnalysisZNF347 
Mutations
ICGC Data PortalZNF347 
TCGA Data PortalZNF347 
Broad Tumor PortalZNF347
OASIS PortalZNF347 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF347  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF347
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF347
DgiDB (Drug Gene Interaction Database)ZNF347
DoCM (Curated mutations)ZNF347 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF347 (select a term)
intoGenZNF347
Cancer3DZNF347(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF347
Genetic Testing Registry ZNF347
NextProtQ96SE7 [Medical]
TSGene84671
GENETestsZNF347
Huge Navigator ZNF347 [HugePedia]
snp3D : Map Gene to Disease84671
BioCentury BCIQZNF347
ClinGenZNF347
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84671
Chemical/Pharm GKB GenePA38143
Clinical trialZNF347
Miscellaneous
canSAR (ICR)ZNF347 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF347
EVEXZNF347
GoPubMedZNF347
iHOPZNF347
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:55 CET 2017

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