Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZNF350-AS1 (ZNF350 antisense RNA 1)

Identity

Alias_namesHCCAT3
hepatocellular carcinoma associated transcript 3 (non-protein coding)
Alias_symbol (synonym)uc002pyc
Other alias
HGNC (Hugo) ZNF350-AS1
LocusID (NCBI) 101669766
Atlas_Id 53349
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 51949134 and ends at 51981367 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF350-AS1   48598
Cards
Entrez_Gene (NCBI)ZNF350-AS1  101669766  ZNF350 antisense RNA 1
AliasesHCCAT3; uc002pyc
GeneCards (Weizmann)ZNF350-AS1
Ensembl hg19 (Hinxton)ENSG00000269235 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000269235 [Gene_View]  chr19:51949134-51981367 [Contig_View]  ZNF350-AS1 [Vega]
ICGC DataPortalENSG00000269235
TCGA cBioPortalZNF350-AS1
AceView (NCBI)ZNF350-AS1
Genatlas (Paris)ZNF350-AS1
WikiGenes101669766
SOURCE (Princeton)ZNF350-AS1
Genetics Home Reference (NIH)ZNF350-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF350-AS1  -     chr19:51949134-51981367 +  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF350-AS1  -     19q13.41   [Description]    (hg19-Feb_2009)
EnsemblZNF350-AS1 - 19q13.41 [CytoView hg19]  ZNF350-AS1 - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBIZNF350-AS1 [Mapview hg19]  ZNF350-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC014606
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF350-AS1
Cluster EST : UnigeneHs.637744 [ NCBI ]
CGAP (NCI)Hs.637744
Alternative Splicing GalleryENSG00000269235
Gene ExpressionZNF350-AS1 [ NCBI-GEO ]   ZNF350-AS1 [ EBI - ARRAY_EXPRESS ]   ZNF350-AS1 [ SEEK ]   ZNF350-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF350-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101669766
GTEX Portal (Tissue expression)ZNF350-AS1
Human Protein AtlasENSG00000269235-ZNF350-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZNF350-AS1
DMDM Disease mutations101669766
Blocks (Seattle)ZNF350-AS1
Human Protein Atlas [tissue]ENSG00000269235-ZNF350-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000269235
BioGRIDZNF350-AS1
STRING (EMBL)ZNF350-AS1
ZODIACZNF350-AS1
Ontologies - Pathways
Huge Navigator ZNF350-AS1 [HugePedia]
snp3D : Map Gene to Disease101669766
BioCentury BCIQZNF350-AS1
ClinGenZNF350-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101669766
Clinical trialZNF350-AS1
Miscellaneous
canSAR (ICR)ZNF350-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF350-AS1
EVEXZNF350-AS1
GoPubMedZNF350-AS1
iHOPZNF350-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:42:33 CET 2017

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