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ZNF354C (zinc finger protein 354C)

Identity

Alias_symbol (synonym)KID3
Other alias
HGNC (Hugo) ZNF354C
LocusID (NCBI) 30832
Atlas_Id 76120
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 178487607 and ends at 178507691 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF354C   16736
Cards
Entrez_Gene (NCBI)ZNF354C  30832  zinc finger protein 354C
AliasesKID3
GeneCards (Weizmann)ZNF354C
Ensembl hg19 (Hinxton) [Gene_View]  chr5:178487607-178507691 [Contig_View]  ZNF354C [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:178487607-178507691 [Contig_View]  ZNF354C [Vega]
TCGA cBioPortalZNF354C
AceView (NCBI)ZNF354C
Genatlas (Paris)ZNF354C
WikiGenes30832
SOURCE (Princeton)ZNF354C
Genetics Home Reference (NIH)ZNF354C
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF354C  -     chr5:178487607-178507691 +  5q35.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF354C  -     5q35.3   [Description]    (hg38-Dec_2013)
EnsemblZNF354C - 5q35.3 [CytoView hg19]  ZNF354C - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBIZNF354C [Mapview hg19]  ZNF354C [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF395540 AF525463 AK124385 AL137483 BC063312
RefSeq transcript (Entrez)NM_014594
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_023133 NW_004929325
Consensus coding sequences : CCDS (NCBI)ZNF354C
Cluster EST : UnigeneHs.272328 [ NCBI ]
CGAP (NCI)Hs.272328
Gene ExpressionZNF354C [ NCBI-GEO ]   ZNF354C [ EBI - ARRAY_EXPRESS ]   ZNF354C [ SEEK ]   ZNF354C [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF354C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)30832
GTEX Portal (Tissue expression)ZNF354C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86Y25   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86Y25  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86Y25
Splice isoforms : SwissVarQ86Y25
PhosPhoSitePlusQ86Y25
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF354C
DMDM Disease mutations30832
Blocks (Seattle)ZNF354C
SuperfamilyQ86Y25
Peptide AtlasQ86Y25
HPRD15785
IPIIPI00097321   
Protein Interaction databases
DIP (DOE-UCLA)Q86Y25
IntAct (EBI)Q86Y25
BioGRIDZNF354C
STRING (EMBL)ZNF354C
ZODIACZNF354C
Ontologies - Pathways
QuickGOQ86Y25
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  cytoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  nuclear membrane  metal ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  cytoplasm  transcription, DNA-templated  regulation of transcription, DNA-templated  nuclear membrane  metal ion binding  
NDEx NetworkZNF354C
Atlas of Cancer Signalling NetworkZNF354C
Wikipedia pathwaysZNF354C
Orthology - Evolution
OrthoDB30832
Phylogenetic Trees/Animal Genes : TreeFamZNF354C
HOVERGENQ86Y25
HOGENOMQ86Y25
Homologs : HomoloGeneZNF354C
Homology/Alignments : Family Browser (UCSC)ZNF354C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF354C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF354C
dbVarZNF354C
ClinVarZNF354C
1000_GenomesZNF354C 
Exome Variant ServerZNF354C
ExAC (Exome Aggregation Consortium)ZNF354C (select the gene name)
Genetic variants : HAPMAP30832
Genomic Variants (DGV)ZNF354C [DGVbeta]
DECIPHER (Syndromes)5:178487607-178507691  
CONAN: Copy Number AnalysisZNF354C 
Mutations
ICGC Data PortalZNF354C 
TCGA Data PortalZNF354C 
Broad Tumor PortalZNF354C
OASIS PortalZNF354C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF354C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF354C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF354C
DgiDB (Drug Gene Interaction Database)ZNF354C
DoCM (Curated mutations)ZNF354C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF354C (select a term)
intoGenZNF354C
Cancer3DZNF354C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF354C
Genetic Testing Registry ZNF354C
NextProtQ86Y25 [Medical]
TSGene30832
GENETestsZNF354C
Huge Navigator ZNF354C [HugePedia]
snp3D : Map Gene to Disease30832
BioCentury BCIQZNF354C
ClinGenZNF354C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD30832
Chemical/Pharm GKB GenePA38184
Clinical trialZNF354C
Miscellaneous
canSAR (ICR)ZNF354C (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF354C
EVEXZNF354C
GoPubMedZNF354C
iHOPZNF354C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:56 CET 2017

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