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ZNF358 (zinc finger protein 358)

Identity

Alias_symbol (synonym)FLJ10390
ZFEND
Other alias
HGNC (Hugo) ZNF358
LocusID (NCBI) 140467
Atlas_Id 76121
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 7516118 and ends at 7521025 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MGAT5B (17q25.2) / ZNF358 (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF358   16838
Cards
Entrez_Gene (NCBI)ZNF358  140467  zinc finger protein 358
AliasesZFEND
GeneCards (Weizmann)ZNF358
Ensembl hg19 (Hinxton)ENSG00000198816 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198816 [Gene_View]  chr19:7516118-7521025 [Contig_View]  ZNF358 [Vega]
ICGC DataPortalENSG00000198816
TCGA cBioPortalZNF358
AceView (NCBI)ZNF358
Genatlas (Paris)ZNF358
WikiGenes140467
SOURCE (Princeton)ZNF358
Genetics Home Reference (NIH)ZNF358
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF358  -     chr19:7516118-7521025 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF358  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblZNF358 - 19p13.2 [CytoView hg19]  ZNF358 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF358 [Mapview hg19]  ZNF358 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001252 BC003585 BC014002 BI601846 C15772
RefSeq transcript (Entrez)NM_018083
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF358
Cluster EST : UnigeneHs.133475 [ NCBI ]
CGAP (NCI)Hs.133475
Alternative Splicing GalleryENSG00000198816
Gene ExpressionZNF358 [ NCBI-GEO ]   ZNF358 [ EBI - ARRAY_EXPRESS ]   ZNF358 [ SEEK ]   ZNF358 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF358 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140467
GTEX Portal (Tissue expression)ZNF358
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NW07   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NW07  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NW07
Splice isoforms : SwissVarQ9NW07
PhosPhoSitePlusQ9NW07
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam00096    pfam13912   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF358
DMDM Disease mutations140467
Blocks (Seattle)ZNF358
SuperfamilyQ9NW07
Human Protein AtlasENSG00000198816
Peptide AtlasQ9NW07
HPRD10331
IPIIPI00478037   IPI01018205   
Protein Interaction databases
DIP (DOE-UCLA)Q9NW07
IntAct (EBI)Q9NW07
FunCoupENSG00000198816
BioGRIDZNF358
STRING (EMBL)ZNF358
ZODIACZNF358
Ontologies - Pathways
QuickGOQ9NW07
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  stem cell population maintenance  neural tube development  embryonic forelimb morphogenesis  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  stem cell population maintenance  neural tube development  embryonic forelimb morphogenesis  metal ion binding  
NDEx NetworkZNF358
Atlas of Cancer Signalling NetworkZNF358
Wikipedia pathwaysZNF358
Orthology - Evolution
OrthoDB140467
GeneTree (enSembl)ENSG00000198816
Phylogenetic Trees/Animal Genes : TreeFamZNF358
HOVERGENQ9NW07
HOGENOMQ9NW07
Homologs : HomoloGeneZNF358
Homology/Alignments : Family Browser (UCSC)ZNF358
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF358 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF358
dbVarZNF358
ClinVarZNF358
1000_GenomesZNF358 
Exome Variant ServerZNF358
ExAC (Exome Aggregation Consortium)ZNF358 (select the gene name)
Genetic variants : HAPMAP140467
Genomic Variants (DGV)ZNF358 [DGVbeta]
DECIPHERZNF358 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF358 
Mutations
ICGC Data PortalZNF358 
TCGA Data PortalZNF358 
Broad Tumor PortalZNF358
OASIS PortalZNF358 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF358  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF358
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF358
DgiDB (Drug Gene Interaction Database)ZNF358
DoCM (Curated mutations)ZNF358 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF358 (select a term)
intoGenZNF358
Cancer3DZNF358(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF358
Genetic Testing Registry ZNF358
NextProtQ9NW07 [Medical]
TSGene140467
GENETestsZNF358
Target ValidationZNF358
Huge Navigator ZNF358 [HugePedia]
snp3D : Map Gene to Disease140467
BioCentury BCIQZNF358
ClinGenZNF358
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140467
Chemical/Pharm GKB GenePA38189
Clinical trialZNF358
Miscellaneous
canSAR (ICR)ZNF358 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF358
EVEXZNF358
GoPubMedZNF358
iHOPZNF358
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:41 CEST 2017

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