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ZNF366 (zinc finger protein 366)

Identity

Alias_symbol (synonym)FLJ39796
Other aliasDCSCRIPT
HGNC (Hugo) ZNF366
LocusID (NCBI) 167465
Atlas_Id 52103
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 71735726 and ends at 71803249 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
POU6F2 (7p14.1) / ZNF366 (5q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF366   18316
Cards
Entrez_Gene (NCBI)ZNF366  167465  zinc finger protein 366
AliasesDCSCRIPT
GeneCards (Weizmann)ZNF366
Ensembl hg19 (Hinxton)ENSG00000178175 [Gene_View]  chr5:71735726-71803249 [Contig_View]  ZNF366 [Vega]
Ensembl hg38 (Hinxton)ENSG00000178175 [Gene_View]  chr5:71735726-71803249 [Contig_View]  ZNF366 [Vega]
ICGC DataPortalENSG00000178175
TCGA cBioPortalZNF366
AceView (NCBI)ZNF366
Genatlas (Paris)ZNF366
WikiGenes167465
SOURCE (Princeton)ZNF366
Genetics Home Reference (NIH)ZNF366
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF366  -     chr5:71735726-71803249 -  5q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF366  -     5q13.2   [Description]    (hg38-Dec_2013)
EnsemblZNF366 - 5q13.2 [CytoView hg19]  ZNF366 - 5q13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF366 [Mapview hg19]  ZNF366 [Mapview hg38]
OMIM610159   
Gene and transcription
Genbank (Entrez)AK090694 AK097115 AM393006 BC029955 BC121053
RefSeq transcript (Entrez)NM_152625
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929322
Consensus coding sequences : CCDS (NCBI)ZNF366
Cluster EST : UnigeneHs.370303 [ NCBI ]
CGAP (NCI)Hs.370303
Alternative Splicing GalleryENSG00000178175
Gene ExpressionZNF366 [ NCBI-GEO ]   ZNF366 [ EBI - ARRAY_EXPRESS ]   ZNF366 [ SEEK ]   ZNF366 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF366 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)167465
GTEX Portal (Tissue expression)ZNF366
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N895   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N895  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N895
Splice isoforms : SwissVarQ8N895
PhosPhoSitePlusQ8N895
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam00096    pfam13912   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF366
DMDM Disease mutations167465
Blocks (Seattle)ZNF366
SuperfamilyQ8N895
Human Protein AtlasENSG00000178175
Peptide AtlasQ8N895
HPRD18329
IPIIPI00167408   IPI00976164   IPI00966415   IPI00940608   
Protein Interaction databases
DIP (DOE-UCLA)Q8N895
IntAct (EBI)Q8N895
FunCoupENSG00000178175
BioGRIDZNF366
STRING (EMBL)ZNF366
ZODIACZNF366
Ontologies - Pathways
QuickGOQ8N895
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription corepressor activity  protein binding  nucleus  transcription, DNA-templated  estrogen receptor binding  negative regulation of intracellular estrogen receptor signaling pathway  response to estrogen  metal ion binding  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  DNA binding  transcription corepressor activity  protein binding  nucleus  transcription, DNA-templated  estrogen receptor binding  negative regulation of intracellular estrogen receptor signaling pathway  response to estrogen  metal ion binding  
NDEx NetworkZNF366
Atlas of Cancer Signalling NetworkZNF366
Wikipedia pathwaysZNF366
Orthology - Evolution
OrthoDB167465
GeneTree (enSembl)ENSG00000178175
Phylogenetic Trees/Animal Genes : TreeFamZNF366
HOVERGENQ8N895
HOGENOMQ8N895
Homologs : HomoloGeneZNF366
Homology/Alignments : Family Browser (UCSC)ZNF366
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF366 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF366
dbVarZNF366
ClinVarZNF366
1000_GenomesZNF366 
Exome Variant ServerZNF366
ExAC (Exome Aggregation Consortium)ZNF366 (select the gene name)
Genetic variants : HAPMAP167465
Genomic Variants (DGV)ZNF366 [DGVbeta]
DECIPHER (Syndromes)5:71735726-71803249  ENSG00000178175
CONAN: Copy Number AnalysisZNF366 
Mutations
ICGC Data PortalZNF366 
TCGA Data PortalZNF366 
Broad Tumor PortalZNF366
OASIS PortalZNF366 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF366  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF366
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF366
DgiDB (Drug Gene Interaction Database)ZNF366
DoCM (Curated mutations)ZNF366 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF366 (select a term)
intoGenZNF366
Cancer3DZNF366(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610159   
Orphanet
MedgenZNF366
Genetic Testing Registry ZNF366
NextProtQ8N895 [Medical]
TSGene167465
GENETestsZNF366
Huge Navigator ZNF366 [HugePedia]
snp3D : Map Gene to Disease167465
BioCentury BCIQZNF366
ClinGenZNF366
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD167465
Chemical/Pharm GKB GenePA38314
Clinical trialZNF366
Miscellaneous
canSAR (ICR)ZNF366 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF366
EVEXZNF366
GoPubMedZNF366
iHOPZNF366
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:25:45 CEST 2017

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