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ZNF385C (zinc finger protein 385C)

Identity

Alias (NCBI)-
HGNC (Hugo) ZNF385C
LocusID (NCBI) 201181
Atlas_Id 76128
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 42025576 and ends at 42038026 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
TAOK1 (17q11.2) / ZNF385C (17q21.2)ZNF385C (17q21.2) / LOC100272228 ()

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF385C   33722
Cards
Entrez_Gene (NCBI)ZNF385C    zinc finger protein 385C
Aliases
GeneCards (Weizmann)ZNF385C
Ensembl hg19 (Hinxton)ENSG00000187595 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187595 [Gene_View]  ENSG00000187595 [Sequence]  chr17:42025576-42038026 [Contig_View]  ZNF385C [Vega]
ICGC DataPortalENSG00000187595
TCGA cBioPortalZNF385C
AceView (NCBI)ZNF385C
Genatlas (Paris)ZNF385C
SOURCE (Princeton)ZNF385C
Genetics Home Reference (NIH)ZNF385C
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF385C  -     chr17:42025576-42038026 -  17q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF385C  -     17q21.2   [Description]    (hg19-Feb_2009)
GoldenPathZNF385C - 17q21.2 [CytoView hg19]  ZNF385C - 17q21.2 [CytoView hg38]
ImmunoBaseENSG00000187595
Genome Data Viewer NCBIZNF385C [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC067901 BC080613 CN264203 H06009
RefSeq transcript (Entrez)NM_001013624 NM_001242704 NM_001378270 NM_001392013 NM_001392014 NM_001392015 NM_001392016 NM_001392017 NM_001392018 NM_001393562
Consensus coding sequences : CCDS (NCBI)ZNF385C
Gene ExpressionZNF385C [ NCBI-GEO ]   ZNF385C [ EBI - ARRAY_EXPRESS ]   ZNF385C [ SEEK ]   ZNF385C [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF385C [ Firebrowse - Broad ]
GenevisibleExpression of ZNF385C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)201181
GTEX Portal (Tissue expression)ZNF385C
Human Protein AtlasENSG00000187595-ZNF385C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ66K41   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ66K41  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ66K41
PhosPhoSitePlusQ66K41
Domains : Interpro (EBI)Matrin/U1-like-C_Znf_C2H2    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  ZnF_U1 (SM00451)  
Conserved Domain (NCBI)ZNF385C
SuperfamilyQ66K41
AlphaFold pdb e-kbQ66K41   
Human Protein Atlas [tissue]ENSG00000187595-ZNF385C [tissue]
HPRD13245
Protein Interaction databases
DIP (DOE-UCLA)Q66K41
IntAct (EBI)Q66K41
BioGRIDZNF385C
STRING (EMBL)ZNF385C
ZODIACZNF385C
Ontologies - Pathways
QuickGOQ66K41
Ontology : AmiGOnucleic acid binding  protein binding  nucleus  zinc ion binding  
Ontology : EGO-EBInucleic acid binding  protein binding  nucleus  zinc ion binding  
NDEx NetworkZNF385C
Atlas of Cancer Signalling NetworkZNF385C
Wikipedia pathwaysZNF385C
Orthology - Evolution
OrthoDB201181
GeneTree (enSembl)ENSG00000187595
Phylogenetic Trees/Animal Genes : TreeFamZNF385C
Homologs : HomoloGeneZNF385C
Homology/Alignments : Family Browser (UCSC)ZNF385C
Gene fusions - Rearrangements
Fusion : QuiverZNF385C
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF385C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF385C
dbVarZNF385C
ClinVarZNF385C
MonarchZNF385C
1000_GenomesZNF385C 
Exome Variant ServerZNF385C
GNOMAD BrowserENSG00000187595
Varsome BrowserZNF385C
ACMGZNF385C variants
VarityQ66K41
Genomic Variants (DGV)ZNF385C [DGVbeta]
DECIPHERZNF385C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF385C 
Mutations
ICGC Data PortalZNF385C 
TCGA Data PortalZNF385C 
Broad Tumor PortalZNF385C
OASIS PortalZNF385C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF385C  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF385C
Mutations and Diseases : HGMDZNF385C
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF385C
DgiDB (Drug Gene Interaction Database)ZNF385C
DoCM (Curated mutations)ZNF385C
CIViC (Clinical Interpretations of Variants in Cancer)ZNF385C
Cancer3DZNF385C
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF385C
MedgenZNF385C
Genetic Testing Registry ZNF385C
NextProtQ66K41 [Medical]
GENETestsZNF385C
Target ValidationZNF385C
Huge Navigator ZNF385C [HugePedia]
ClinGenZNF385C
Clinical trials, drugs, therapy
MyCancerGenomeZNF385C
Protein Interactions : CTDZNF385C
Pharm GKB GenePA162410139
PharosQ66K41
Clinical trialZNF385C
Miscellaneous
canSAR (ICR)ZNF385C
HarmonizomeZNF385C
DataMed IndexZNF385C
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF385C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:29:37 CEST 2021

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