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ZNF385C (zinc finger protein 385C)

Identity

Other alias-
HGNC (Hugo) ZNF385C
LocusID (NCBI) 201181
Atlas_Id 76128
Location 17q21.2  [Link to chromosome band 17q21]
Location_base_pair Starts at 42025576 and ends at 42038026 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
TAOK1 (17q11.2) / ZNF385C (17q21.2)ZNF385C (17q21.2) / LOC100272228 ()

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF385C   33722
Cards
Entrez_Gene (NCBI)ZNF385C  201181  zinc finger protein 385C
Aliases
GeneCards (Weizmann)ZNF385C
Ensembl hg19 (Hinxton)ENSG00000187595 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187595 [Gene_View]  chr17:42025576-42038026 [Contig_View]  ZNF385C [Vega]
ICGC DataPortalENSG00000187595
TCGA cBioPortalZNF385C
AceView (NCBI)ZNF385C
Genatlas (Paris)ZNF385C
WikiGenes201181
SOURCE (Princeton)ZNF385C
Genetics Home Reference (NIH)ZNF385C
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF385C  -     chr17:42025576-42038026 -  17q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF385C  -     17q21.2   [Description]    (hg19-Feb_2009)
EnsemblZNF385C - 17q21.2 [CytoView hg19]  ZNF385C - 17q21.2 [CytoView hg38]
Mapping of homologs : NCBIZNF385C [Mapview hg19]  ZNF385C [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC067901 BC080613 CN264203 H06009
RefSeq transcript (Entrez)NM_001013624 NM_001242704
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF385C
Cluster EST : UnigeneHs.443140 [ NCBI ]
CGAP (NCI)Hs.443140
Alternative Splicing GalleryENSG00000187595
Gene ExpressionZNF385C [ NCBI-GEO ]   ZNF385C [ EBI - ARRAY_EXPRESS ]   ZNF385C [ SEEK ]   ZNF385C [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF385C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)201181
GTEX Portal (Tissue expression)ZNF385C
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ66K41   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ66K41  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ66K41
Splice isoforms : SwissVarQ66K41
PhosPhoSitePlusQ66K41
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_U1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  ZnF_U1 (SM00451)  
Conserved Domain (NCBI)ZNF385C
DMDM Disease mutations201181
Blocks (Seattle)ZNF385C
SuperfamilyQ66K41
Human Protein AtlasENSG00000187595
Peptide AtlasQ66K41
HPRD13245
IPIIPI01025145   IPI00925003   IPI00885185   
Protein Interaction databases
DIP (DOE-UCLA)Q66K41
IntAct (EBI)Q66K41
FunCoupENSG00000187595
BioGRIDZNF385C
STRING (EMBL)ZNF385C
ZODIACZNF385C
Ontologies - Pathways
QuickGOQ66K41
Ontology : AmiGOp53 binding  RNA binding  protein binding  nucleus  zinc ion binding  intrinsic apoptotic signaling pathway by p53 class mediator  
Ontology : EGO-EBIp53 binding  RNA binding  protein binding  nucleus  zinc ion binding  intrinsic apoptotic signaling pathway by p53 class mediator  
NDEx NetworkZNF385C
Atlas of Cancer Signalling NetworkZNF385C
Wikipedia pathwaysZNF385C
Orthology - Evolution
OrthoDB201181
GeneTree (enSembl)ENSG00000187595
Phylogenetic Trees/Animal Genes : TreeFamZNF385C
HOVERGENQ66K41
HOGENOMQ66K41
Homologs : HomoloGeneZNF385C
Homology/Alignments : Family Browser (UCSC)ZNF385C
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF385C [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF385C
dbVarZNF385C
ClinVarZNF385C
1000_GenomesZNF385C 
Exome Variant ServerZNF385C
ExAC (Exome Aggregation Consortium)ZNF385C (select the gene name)
Genetic variants : HAPMAP201181
Genomic Variants (DGV)ZNF385C [DGVbeta]
DECIPHERZNF385C [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF385C 
Mutations
ICGC Data PortalZNF385C 
TCGA Data PortalZNF385C 
Broad Tumor PortalZNF385C
OASIS PortalZNF385C [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF385C  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF385C
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF385C
DgiDB (Drug Gene Interaction Database)ZNF385C
DoCM (Curated mutations)ZNF385C (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF385C (select a term)
intoGenZNF385C
Cancer3DZNF385C(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF385C
Genetic Testing Registry ZNF385C
NextProtQ66K41 [Medical]
TSGene201181
GENETestsZNF385C
Target ValidationZNF385C
Huge Navigator ZNF385C [HugePedia]
snp3D : Map Gene to Disease201181
BioCentury BCIQZNF385C
ClinGenZNF385C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD201181
Chemical/Pharm GKB GenePA162410139
Clinical trialZNF385C
Miscellaneous
canSAR (ICR)ZNF385C (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF385C
EVEXZNF385C
GoPubMedZNF385C
iHOPZNF385C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:21 CEST 2017

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