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ZNF385D (zinc finger protein 385D)

Identity

Alias_namesZNF659
zinc finger protein 659
Alias_symbol (synonym)FLJ22419
Other alias
HGNC (Hugo) ZNF385D
LocusID (NCBI) 79750
Atlas_Id 76129
Location 3p24.3  [Link to chromosome band 3p24]
Location_base_pair Starts at 21420998 and ends at 21751324 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
GBE1 (3p12.2) / ZNF385D (3p24.3)HIST1H3B (6p22.2) / ZNF385D (3p24.3)LCK (1p35.1) / ZNF385D (3p24.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF385D   26191
Cards
Entrez_Gene (NCBI)ZNF385D  79750  zinc finger protein 385D
AliasesZNF659
GeneCards (Weizmann)ZNF385D
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:21420998-21751324 [Contig_View]  ZNF385D [Vega]
TCGA cBioPortalZNF385D
AceView (NCBI)ZNF385D
Genatlas (Paris)ZNF385D
WikiGenes79750
SOURCE (Princeton)ZNF385D
Genetics Home Reference (NIH)ZNF385D
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF385D  -     chr3:21420998-21751324 -  3p24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF385D  -     3p24.3   [Description]    (hg19-Feb_2009)
EnsemblZNF385D - 3p24.3 [CytoView hg19]  ZNF385D - 3p24.3 [CytoView hg38]
Mapping of homologs : NCBIZNF385D [Mapview hg19]  ZNF385D [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK026072 AK310298 BC007212 HQ447299
RefSeq transcript (Entrez)NM_024697
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF385D
Cluster EST : UnigeneHs.21026 [ NCBI ]
CGAP (NCI)Hs.21026
Gene ExpressionZNF385D [ NCBI-GEO ]   ZNF385D [ EBI - ARRAY_EXPRESS ]   ZNF385D [ SEEK ]   ZNF385D [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF385D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79750
GTEX Portal (Tissue expression)ZNF385D
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H6B1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H6B1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H6B1
Splice isoforms : SwissVarQ9H6B1
PhosPhoSitePlusQ9H6B1
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_U1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  ZnF_U1 (SM00451)  
Conserved Domain (NCBI)ZNF385D
DMDM Disease mutations79750
Blocks (Seattle)ZNF385D
SuperfamilyQ9H6B1
Peptide AtlasQ9H6B1
HPRD07990
IPIIPI00003003   IPI00924592   
Protein Interaction databases
DIP (DOE-UCLA)Q9H6B1
IntAct (EBI)Q9H6B1
BioGRIDZNF385D
STRING (EMBL)ZNF385D
ZODIACZNF385D
Ontologies - Pathways
QuickGOQ9H6B1
Ontology : AmiGOp53 binding  RNA binding  nucleus  zinc ion binding  intrinsic apoptotic signaling pathway by p53 class mediator  
Ontology : EGO-EBIp53 binding  RNA binding  nucleus  zinc ion binding  intrinsic apoptotic signaling pathway by p53 class mediator  
NDEx NetworkZNF385D
Atlas of Cancer Signalling NetworkZNF385D
Wikipedia pathwaysZNF385D
Orthology - Evolution
OrthoDB79750
Phylogenetic Trees/Animal Genes : TreeFamZNF385D
HOVERGENQ9H6B1
HOGENOMQ9H6B1
Homologs : HomoloGeneZNF385D
Homology/Alignments : Family Browser (UCSC)ZNF385D
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF385D [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF385D
dbVarZNF385D
ClinVarZNF385D
1000_GenomesZNF385D 
Exome Variant ServerZNF385D
ExAC (Exome Aggregation Consortium)ZNF385D (select the gene name)
Genetic variants : HAPMAP79750
Genomic Variants (DGV)ZNF385D [DGVbeta]
DECIPHERZNF385D [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF385D 
Mutations
ICGC Data PortalZNF385D 
TCGA Data PortalZNF385D 
Broad Tumor PortalZNF385D
OASIS PortalZNF385D [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF385D  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF385D
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF385D
DgiDB (Drug Gene Interaction Database)ZNF385D
DoCM (Curated mutations)ZNF385D (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF385D (select a term)
intoGenZNF385D
Cancer3DZNF385D(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF385D
Genetic Testing Registry ZNF385D
NextProtQ9H6B1 [Medical]
TSGene79750
GENETestsZNF385D
Target ValidationZNF385D
Huge Navigator ZNF385D [HugePedia]
snp3D : Map Gene to Disease79750
BioCentury BCIQZNF385D
ClinGenZNF385D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79750
Chemical/Pharm GKB GenePA162410152
Clinical trialZNF385D
Miscellaneous
canSAR (ICR)ZNF385D (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF385D
EVEXZNF385D
GoPubMedZNF385D
iHOPZNF385D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:21 CEST 2017

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