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ZNF414 (zinc finger protein 414)

Identity

Alias_symbol (synonym)MGC15716
Zfp414
Other aliasZFP414
HGNC (Hugo) ZNF414
LocusID (NCBI) 84330
Atlas_Id 76140
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 8575462 and ends at 8579048 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
AAAS (12q13.13) / ZNF414 (19p13.2)ZNF414 (19p13.2) / MYO1F (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF414   20630
Cards
Entrez_Gene (NCBI)ZNF414  84330  zinc finger protein 414
AliasesZFP414
GeneCards (Weizmann)ZNF414
Ensembl hg19 (Hinxton)ENSG00000133250 [Gene_View]  chr19:8575462-8579048 [Contig_View]  ZNF414 [Vega]
Ensembl hg38 (Hinxton)ENSG00000133250 [Gene_View]  chr19:8575462-8579048 [Contig_View]  ZNF414 [Vega]
ICGC DataPortalENSG00000133250
TCGA cBioPortalZNF414
AceView (NCBI)ZNF414
Genatlas (Paris)ZNF414
WikiGenes84330
SOURCE (Princeton)ZNF414
Genetics Home Reference (NIH)ZNF414
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF414  -     chr19:8575462-8579048 -  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF414  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblZNF414 - 19p13.2 [CytoView hg19]  ZNF414 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF414 [Mapview hg19]  ZNF414 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI937020 AK074191 AK225034 BC007310 BC071937
RefSeq transcript (Entrez)NM_001146175 NM_032370
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929413
Consensus coding sequences : CCDS (NCBI)ZNF414
Cluster EST : UnigeneHs.515114 [ NCBI ]
CGAP (NCI)Hs.515114
Alternative Splicing GalleryENSG00000133250
Gene ExpressionZNF414 [ NCBI-GEO ]   ZNF414 [ EBI - ARRAY_EXPRESS ]   ZNF414 [ SEEK ]   ZNF414 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF414 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84330
GTEX Portal (Tissue expression)ZNF414
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IQ9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IQ9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IQ9
Splice isoforms : SwissVarQ96IQ9
PhosPhoSitePlusQ96IQ9
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF414
DMDM Disease mutations84330
Blocks (Seattle)ZNF414
SuperfamilyQ96IQ9
Human Protein AtlasENSG00000133250
Peptide AtlasQ96IQ9
HPRD17511
IPIIPI00306237   IPI00640316   
Protein Interaction databases
DIP (DOE-UCLA)Q96IQ9
IntAct (EBI)Q96IQ9
FunCoupENSG00000133250
BioGRIDZNF414
STRING (EMBL)ZNF414
ZODIACZNF414
Ontologies - Pathways
QuickGOQ96IQ9
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF414
Atlas of Cancer Signalling NetworkZNF414
Wikipedia pathwaysZNF414
Orthology - Evolution
OrthoDB84330
GeneTree (enSembl)ENSG00000133250
Phylogenetic Trees/Animal Genes : TreeFamZNF414
HOVERGENQ96IQ9
HOGENOMQ96IQ9
Homologs : HomoloGeneZNF414
Homology/Alignments : Family Browser (UCSC)ZNF414
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF414 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF414
dbVarZNF414
ClinVarZNF414
1000_GenomesZNF414 
Exome Variant ServerZNF414
ExAC (Exome Aggregation Consortium)ZNF414 (select the gene name)
Genetic variants : HAPMAP84330
Genomic Variants (DGV)ZNF414 [DGVbeta]
DECIPHER (Syndromes)19:8575462-8579048  ENSG00000133250
CONAN: Copy Number AnalysisZNF414 
Mutations
ICGC Data PortalZNF414 
TCGA Data PortalZNF414 
Broad Tumor PortalZNF414
OASIS PortalZNF414 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF414  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF414
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF414
DgiDB (Drug Gene Interaction Database)ZNF414
DoCM (Curated mutations)ZNF414 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF414 (select a term)
intoGenZNF414
Cancer3DZNF414(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF414
Genetic Testing Registry ZNF414
NextProtQ96IQ9 [Medical]
TSGene84330
GENETestsZNF414
Huge Navigator ZNF414 [HugePedia]
snp3D : Map Gene to Disease84330
BioCentury BCIQZNF414
ClinGenZNF414
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84330
Chemical/Pharm GKB GenePA142670521
Clinical trialZNF414
Miscellaneous
canSAR (ICR)ZNF414 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF414
EVEXZNF414
GoPubMedZNF414
iHOPZNF414
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:52:59 CET 2017

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