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ZNF414 (zinc finger protein 414)

Identity

Alias (NCBI)ZFP414
HGNC (Hugo) ZNF414
HGNC Alias symbMGC15716
Zfp414
LocusID (NCBI) 84330
Atlas_Id 57897
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 8511336 and ends at 8514167 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AAAS (12q13.13) / ZNF414 (19p13.2)ZNF414 (19p13.2) / MYO1F (19p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  ZNF414/MYO1F (19p13)


External links

Nomenclature
HGNC (Hugo)ZNF414   20630
Cards
Entrez_Gene (NCBI)ZNF414  84330  zinc finger protein 414
AliasesZFP414
GeneCards (Weizmann)ZNF414
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr19:8511336-8514167 [Contig_View]  ZNF414 [Vega]
TCGA cBioPortalZNF414
AceView (NCBI)ZNF414
Genatlas (Paris)ZNF414
WikiGenes84330
SOURCE (Princeton)ZNF414
Genetics Home Reference (NIH)ZNF414
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF414  -     chr19:8511336-8514167 -  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF414  -     19p13.2   [Description]    (hg19-Feb_2009)
GoldenPathZNF414 - 19p13.2 [CytoView hg19]  ZNF414 - 19p13.2 [CytoView hg38]
genome Data Viewer NCBIZNF414 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI937020 AK074191 AK225034 BC007310 BC071937
RefSeq transcript (Entrez)NM_001146175 NM_032370
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF414
Gene ExpressionZNF414 [ NCBI-GEO ]   ZNF414 [ EBI - ARRAY_EXPRESS ]   ZNF414 [ SEEK ]   ZNF414 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF414 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF414 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84330
GTEX Portal (Tissue expression)ZNF414
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96IQ9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96IQ9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96IQ9
Splice isoforms : SwissVarQ96IQ9
PhosPhoSitePlusQ96IQ9
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)ZN414    Znf-C2H2_ribbon    Znf_C2H2_type   
Domain families : Pfam (Sanger)zf-C2H2_8 (PF15909)   
Domain families : Pfam (NCBI)pfam15909   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF414
DMDM Disease mutations84330
Blocks (Seattle)ZNF414
SuperfamilyQ96IQ9
Peptide AtlasQ96IQ9
IPIIPI00306237   IPI00640316   
Protein Interaction databases
DIP (DOE-UCLA)Q96IQ9
IntAct (EBI)Q96IQ9
BioGRIDZNF414
STRING (EMBL)ZNF414
ZODIACZNF414
Ontologies - Pathways
QuickGOQ96IQ9
Ontology : AmiGOnuclear chromatin  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  protein binding  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBInuclear chromatin  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  protein binding  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF414
Atlas of Cancer Signalling NetworkZNF414
Wikipedia pathwaysZNF414
Orthology - Evolution
OrthoDB84330
Phylogenetic Trees/Animal Genes : TreeFamZNF414
HOGENOMQ96IQ9
Homologs : HomoloGeneZNF414
Homology/Alignments : Family Browser (UCSC)ZNF414
Gene fusions - Rearrangements
Fusion : QuiverZNF414
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF414 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF414
dbVarZNF414
ClinVarZNF414
1000_GenomesZNF414 
Exome Variant ServerZNF414
Varsome BrowserZNF414
Genetic variants : HAPMAP84330
Genomic Variants (DGV)ZNF414 [DGVbeta]
DECIPHERZNF414 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF414 
Mutations
ICGC Data PortalZNF414 
TCGA Data PortalZNF414 
Broad Tumor PortalZNF414
OASIS PortalZNF414 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF414  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF414
Mutations and Diseases : HGMDZNF414
BioMutasearch ZNF414
DgiDB (Drug Gene Interaction Database)ZNF414
DoCM (Curated mutations)ZNF414 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF414 (select a term)
intoGenZNF414
Cancer3DZNF414(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF414
MedgenZNF414
Genetic Testing Registry ZNF414
NextProtQ96IQ9 [Medical]
TSGene84330
GENETestsZNF414
Target ValidationZNF414
Huge Navigator ZNF414 [HugePedia]
snp3D : Map Gene to Disease84330
BioCentury BCIQZNF414
ClinGenZNF414
Clinical trials, drugs, therapy
Protein Interactions : CTD84330
Pharm GKB GenePA142670521
Clinical trialZNF414
Miscellaneous
canSAR (ICR)ZNF414 (select the gene name)
HarmonizomeZNF414
DataMed IndexZNF414
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF414
EVEXZNF414
GoPubMedZNF414
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jul 16 15:43:29 CEST 2020

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