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ZNF430 (zinc finger protein 430)

Identity

Alias_symbol (synonym)FLJ13659
Other alias-
HGNC (Hugo) ZNF430
LocusID (NCBI) 80264
Atlas_Id 76150
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 21020620 and ends at 21060046 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF430 (19p12) / CD19 (16p11.2)ZNF430 (19p12) / GABRB1 (4p12)ZNF430 (19p12) / KCNIP4 (4p15.31)
ZNF430 CD19ZNF430 KCNIP4

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF430   20808
Cards
Entrez_Gene (NCBI)ZNF430  80264  zinc finger protein 430
Aliases
GeneCards (Weizmann)ZNF430
Ensembl hg19 (Hinxton)ENSG00000118620 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000118620 [Gene_View]  chr19:21020620-21060046 [Contig_View]  ZNF430 [Vega]
ICGC DataPortalENSG00000118620
TCGA cBioPortalZNF430
AceView (NCBI)ZNF430
Genatlas (Paris)ZNF430
WikiGenes80264
SOURCE (Princeton)ZNF430
Genetics Home Reference (NIH)ZNF430
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF430  -     chr19:21020620-21060046 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF430  -     19p12   [Description]    (hg19-Feb_2009)
EnsemblZNF430 - 19p12 [CytoView hg19]  ZNF430 - 19p12 [CytoView hg38]
Mapping of homologs : NCBIZNF430 [Mapview hg19]  ZNF430 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023721 AK290475 AL832422 AY269787 BC111776
RefSeq transcript (Entrez)NM_001172671 NM_025189
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF430
Cluster EST : UnigeneHs.729202 [ NCBI ]
CGAP (NCI)Hs.729202
Alternative Splicing GalleryENSG00000118620
Gene ExpressionZNF430 [ NCBI-GEO ]   ZNF430 [ EBI - ARRAY_EXPRESS ]   ZNF430 [ SEEK ]   ZNF430 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF430 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80264
GTEX Portal (Tissue expression)ZNF430
Human Protein AtlasENSG00000118620-ZNF430 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H8G1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H8G1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H8G1
Splice isoforms : SwissVarQ9H8G1
PhosPhoSitePlusQ9H8G1
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF430
DMDM Disease mutations80264
Blocks (Seattle)ZNF430
SuperfamilyQ9H8G1
Human Protein Atlas [tissue]ENSG00000118620-ZNF430 [tissue]
Peptide AtlasQ9H8G1
HPRD15788
IPIIPI00018748   IPI00956121   
Protein Interaction databases
DIP (DOE-UCLA)Q9H8G1
IntAct (EBI)Q9H8G1
FunCoupENSG00000118620
BioGRIDZNF430
STRING (EMBL)ZNF430
ZODIACZNF430
Ontologies - Pathways
QuickGOQ9H8G1
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  substantia nigra development  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  substantia nigra development  metal ion binding  
NDEx NetworkZNF430
Atlas of Cancer Signalling NetworkZNF430
Wikipedia pathwaysZNF430
Orthology - Evolution
OrthoDB80264
GeneTree (enSembl)ENSG00000118620
Phylogenetic Trees/Animal Genes : TreeFamZNF430
HOVERGENQ9H8G1
HOGENOMQ9H8G1
Homologs : HomoloGeneZNF430
Homology/Alignments : Family Browser (UCSC)ZNF430
Gene fusions - Rearrangements
Fusion: TCGAZNF430 CD19
Fusion: TCGAZNF430 KCNIP4
Fusion: Tumor Portal ZNF430
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF430 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF430
dbVarZNF430
ClinVarZNF430
1000_GenomesZNF430 
Exome Variant ServerZNF430
ExAC (Exome Aggregation Consortium)ENSG00000118620
GNOMAD BrowserENSG00000118620
Genetic variants : HAPMAP80264
Genomic Variants (DGV)ZNF430 [DGVbeta]
DECIPHERZNF430 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF430 
Mutations
ICGC Data PortalZNF430 
TCGA Data PortalZNF430 
Broad Tumor PortalZNF430
OASIS PortalZNF430 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF430  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF430
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF430
DgiDB (Drug Gene Interaction Database)ZNF430
DoCM (Curated mutations)ZNF430 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF430 (select a term)
intoGenZNF430
Cancer3DZNF430(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF430
Genetic Testing Registry ZNF430
NextProtQ9H8G1 [Medical]
TSGene80264
GENETestsZNF430
Target ValidationZNF430
Huge Navigator ZNF430 [HugePedia]
snp3D : Map Gene to Disease80264
BioCentury BCIQZNF430
ClinGenZNF430
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80264
Chemical/Pharm GKB GenePA134987901
Clinical trialZNF430
Miscellaneous
canSAR (ICR)ZNF430 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF430
EVEXZNF430
GoPubMedZNF430
iHOPZNF430
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:37:06 CET 2017

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