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ZNF431 (zinc finger protein 431)

Identity

Alias_symbol (synonym)KIAA1969
Other alias-
HGNC (Hugo) ZNF431
LocusID (NCBI) 170959
Atlas_Id 76151
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 21142010 and ends at 21186002 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF431 (19p12) / WIZ (19p13.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF431   20809
Cards
Entrez_Gene (NCBI)ZNF431  170959  zinc finger protein 431
Aliases
GeneCards (Weizmann)ZNF431
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:21142010-21186002 [Contig_View]  ZNF431 [Vega]
TCGA cBioPortalZNF431
AceView (NCBI)ZNF431
Genatlas (Paris)ZNF431
WikiGenes170959
SOURCE (Princeton)ZNF431
Genetics Home Reference (NIH)ZNF431
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF431  -     chr19:21142010-21186002 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF431  -     19p12   [Description]    (hg19-Feb_2009)
EnsemblZNF431 - 19p12 [CytoView hg19]  ZNF431 - 19p12 [CytoView hg38]
Mapping of homologs : NCBIZNF431 [Mapview hg19]  ZNF431 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB075849 AK021615 AK024160 AK293072 AK308127
RefSeq transcript (Entrez)NM_001319124 NM_001319126 NM_001319127 NM_133473
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF431
Cluster EST : UnigeneHs.689835 [ NCBI ]
CGAP (NCI)Hs.689835
Gene ExpressionZNF431 [ NCBI-GEO ]   ZNF431 [ EBI - ARRAY_EXPRESS ]   ZNF431 [ SEEK ]   ZNF431 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF431 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)170959
GTEX Portal (Tissue expression)ZNF431
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TF32   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TF32  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TF32
Splice isoforms : SwissVarQ8TF32
PhosPhoSitePlusQ8TF32
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF431
DMDM Disease mutations170959
Blocks (Seattle)ZNF431
SuperfamilyQ8TF32
Peptide AtlasQ8TF32
HPRD15789
IPIIPI00328207   
Protein Interaction databases
DIP (DOE-UCLA)Q8TF32
IntAct (EBI)Q8TF32
BioGRIDZNF431
STRING (EMBL)ZNF431
ZODIACZNF431
Ontologies - Pathways
QuickGOQ8TF32
Ontology : AmiGOnegative regulation of transcription from RNA polymerase II promoter  core promoter sequence-specific DNA binding  chromatin binding  nucleus  transcription, DNA-templated  cell differentiation  negative regulation of sequence-specific DNA binding transcription factor activity  metal ion binding  
Ontology : EGO-EBInegative regulation of transcription from RNA polymerase II promoter  core promoter sequence-specific DNA binding  chromatin binding  nucleus  transcription, DNA-templated  cell differentiation  negative regulation of sequence-specific DNA binding transcription factor activity  metal ion binding  
NDEx NetworkZNF431
Atlas of Cancer Signalling NetworkZNF431
Wikipedia pathwaysZNF431
Orthology - Evolution
OrthoDB170959
Phylogenetic Trees/Animal Genes : TreeFamZNF431
HOVERGENQ8TF32
HOGENOMQ8TF32
Homologs : HomoloGeneZNF431
Homology/Alignments : Family Browser (UCSC)ZNF431
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF431 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF431
dbVarZNF431
ClinVarZNF431
1000_GenomesZNF431 
Exome Variant ServerZNF431
ExAC (Exome Aggregation Consortium)ZNF431 (select the gene name)
Genetic variants : HAPMAP170959
Genomic Variants (DGV)ZNF431 [DGVbeta]
DECIPHERZNF431 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF431 
Mutations
ICGC Data PortalZNF431 
TCGA Data PortalZNF431 
Broad Tumor PortalZNF431
OASIS PortalZNF431 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF431  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF431
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF431
DgiDB (Drug Gene Interaction Database)ZNF431
DoCM (Curated mutations)ZNF431 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF431 (select a term)
intoGenZNF431
Cancer3DZNF431(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF431
Genetic Testing Registry ZNF431
NextProtQ8TF32 [Medical]
TSGene170959
GENETestsZNF431
Target ValidationZNF431
Huge Navigator ZNF431 [HugePedia]
snp3D : Map Gene to Disease170959
BioCentury BCIQZNF431
ClinGenZNF431
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD170959
Chemical/Pharm GKB GenePA134932493
Clinical trialZNF431
Miscellaneous
canSAR (ICR)ZNF431 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF431
EVEXZNF431
GoPubMedZNF431
iHOPZNF431
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:45 CEST 2017

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