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ZNF441 (zinc finger protein 441)

Identity

Alias_symbol (synonym)FLJ38637
Other alias-
HGNC (Hugo) ZNF441
LocusID (NCBI) 126068
Atlas_Id 76160
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 11877815 and ends at 11894893 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF441   20875
Cards
Entrez_Gene (NCBI)ZNF441  126068  zinc finger protein 441
Aliases
GeneCards (Weizmann)ZNF441
Ensembl hg19 (Hinxton)ENSG00000197044 [Gene_View]  chr19:11877815-11894893 [Contig_View]  ZNF441 [Vega]
Ensembl hg38 (Hinxton)ENSG00000197044 [Gene_View]  chr19:11877815-11894893 [Contig_View]  ZNF441 [Vega]
ICGC DataPortalENSG00000197044
TCGA cBioPortalZNF441
AceView (NCBI)ZNF441
Genatlas (Paris)ZNF441
WikiGenes126068
SOURCE (Princeton)ZNF441
Genetics Home Reference (NIH)ZNF441
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF441  -     chr19:11877815-11894893 +  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF441  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblZNF441 - 19p13.2 [CytoView hg19]  ZNF441 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF441 [Mapview hg19]  ZNF441 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092721 AK095956 BC144217 BX649086 DB250168
RefSeq transcript (Entrez)NM_152355
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)ZNF441
Cluster EST : UnigeneHs.675132 [ NCBI ]
CGAP (NCI)Hs.675132
Alternative Splicing GalleryENSG00000197044
Gene ExpressionZNF441 [ NCBI-GEO ]   ZNF441 [ EBI - ARRAY_EXPRESS ]   ZNF441 [ SEEK ]   ZNF441 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF441 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)126068
GTEX Portal (Tissue expression)ZNF441
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8Z8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8Z8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8Z8
Splice isoforms : SwissVarQ8N8Z8
PhosPhoSitePlusQ8N8Z8
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF441
DMDM Disease mutations126068
Blocks (Seattle)ZNF441
SuperfamilyQ8N8Z8
Human Protein AtlasENSG00000197044
Peptide AtlasQ8N8Z8
HPRD15794
IPIIPI00647184   IPI00175390   IPI00975592   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8Z8
IntAct (EBI)Q8N8Z8
FunCoupENSG00000197044
BioGRIDZNF441
STRING (EMBL)ZNF441
ZODIACZNF441
Ontologies - Pathways
QuickGOQ8N8Z8
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF441
Atlas of Cancer Signalling NetworkZNF441
Wikipedia pathwaysZNF441
Orthology - Evolution
OrthoDB126068
GeneTree (enSembl)ENSG00000197044
Phylogenetic Trees/Animal Genes : TreeFamZNF441
HOVERGENQ8N8Z8
HOGENOMQ8N8Z8
Homologs : HomoloGeneZNF441
Homology/Alignments : Family Browser (UCSC)ZNF441
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF441 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF441
dbVarZNF441
ClinVarZNF441
1000_GenomesZNF441 
Exome Variant ServerZNF441
ExAC (Exome Aggregation Consortium)ZNF441 (select the gene name)
Genetic variants : HAPMAP126068
Genomic Variants (DGV)ZNF441 [DGVbeta]
DECIPHER (Syndromes)19:11877815-11894893  ENSG00000197044
CONAN: Copy Number AnalysisZNF441 
Mutations
ICGC Data PortalZNF441 
TCGA Data PortalZNF441 
Broad Tumor PortalZNF441
OASIS PortalZNF441 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF441  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF441
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF441
DgiDB (Drug Gene Interaction Database)ZNF441
DoCM (Curated mutations)ZNF441 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF441 (select a term)
intoGenZNF441
Cancer3DZNF441(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF441
Genetic Testing Registry ZNF441
NextProtQ8N8Z8 [Medical]
TSGene126068
GENETestsZNF441
Huge Navigator ZNF441 [HugePedia]
snp3D : Map Gene to Disease126068
BioCentury BCIQZNF441
ClinGenZNF441
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD126068
Chemical/Pharm GKB GenePA134991367
Clinical trialZNF441
Miscellaneous
canSAR (ICR)ZNF441 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF441
EVEXZNF441
GoPubMedZNF441
iHOPZNF441
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:53:03 CET 2017

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