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ZNF443 (zinc finger protein 443)

Identity

Alias_symbol (synonym)ZK1
Other alias
HGNC (Hugo) ZNF443
LocusID (NCBI) 10224
Atlas_Id 76162
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 12429706 and ends at 12441112 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF443   20878
Cards
Entrez_Gene (NCBI)ZNF443  10224  zinc finger protein 443
AliasesZK1
GeneCards (Weizmann)ZNF443
Ensembl hg19 (Hinxton)ENSG00000180855 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180855 [Gene_View]  chr19:12429706-12441112 [Contig_View]  ZNF443 [Vega]
ICGC DataPortalENSG00000180855
TCGA cBioPortalZNF443
AceView (NCBI)ZNF443
Genatlas (Paris)ZNF443
WikiGenes10224
SOURCE (Princeton)ZNF443
Genetics Home Reference (NIH)ZNF443
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF443  -     chr19:12429706-12441112 -  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF443  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblZNF443 - 19p13.2 [CytoView hg19]  ZNF443 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF443 [Mapview hg19]  ZNF443 [Mapview hg38]
OMIM606697   
Gene and transcription
Genbank (Entrez)AB011414 AK023025 AK025564 AK299532 BC032753
RefSeq transcript (Entrez)NM_005815
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF443
Cluster EST : UnigeneHs.720755 [ NCBI ]
CGAP (NCI)Hs.720755
Alternative Splicing GalleryENSG00000180855
Gene ExpressionZNF443 [ NCBI-GEO ]   ZNF443 [ EBI - ARRAY_EXPRESS ]   ZNF443 [ SEEK ]   ZNF443 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF443 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10224
GTEX Portal (Tissue expression)ZNF443
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2A4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2A4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2A4
Splice isoforms : SwissVarQ9Y2A4
PhosPhoSitePlusQ9Y2A4
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF443
DMDM Disease mutations10224
Blocks (Seattle)ZNF443
SuperfamilyQ9Y2A4
Human Protein AtlasENSG00000180855
Peptide AtlasQ9Y2A4
HPRD09460
IPIIPI00473113   IPI00910831   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2A4
IntAct (EBI)Q9Y2A4
FunCoupENSG00000180855
BioGRIDZNF443
STRING (EMBL)ZNF443
ZODIACZNF443
Ontologies - Pathways
QuickGOQ9Y2A4
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  apoptotic process  response to stress  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  apoptotic process  response to stress  metal ion binding  
NDEx NetworkZNF443
Atlas of Cancer Signalling NetworkZNF443
Wikipedia pathwaysZNF443
Orthology - Evolution
OrthoDB10224
GeneTree (enSembl)ENSG00000180855
Phylogenetic Trees/Animal Genes : TreeFamZNF443
HOVERGENQ9Y2A4
HOGENOMQ9Y2A4
Homologs : HomoloGeneZNF443
Homology/Alignments : Family Browser (UCSC)ZNF443
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF443 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF443
dbVarZNF443
ClinVarZNF443
1000_GenomesZNF443 
Exome Variant ServerZNF443
ExAC (Exome Aggregation Consortium)ZNF443 (select the gene name)
Genetic variants : HAPMAP10224
Genomic Variants (DGV)ZNF443 [DGVbeta]
DECIPHERZNF443 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF443 
Mutations
ICGC Data PortalZNF443 
TCGA Data PortalZNF443 
Broad Tumor PortalZNF443
OASIS PortalZNF443 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF443  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF443
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF443
DgiDB (Drug Gene Interaction Database)ZNF443
DoCM (Curated mutations)ZNF443 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF443 (select a term)
intoGenZNF443
Cancer3DZNF443(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606697   
Orphanet
MedgenZNF443
Genetic Testing Registry ZNF443
NextProtQ9Y2A4 [Medical]
TSGene10224
GENETestsZNF443
Target ValidationZNF443
Huge Navigator ZNF443 [HugePedia]
snp3D : Map Gene to Disease10224
BioCentury BCIQZNF443
ClinGenZNF443
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10224
Chemical/Pharm GKB GenePA134968382
Clinical trialZNF443
Miscellaneous
canSAR (ICR)ZNF443 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF443
EVEXZNF443
GoPubMedZNF443
iHOPZNF443
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:46 CEST 2017

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