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ZNF460 (zinc finger protein 460)

Identity

Alias_namesZNF272
zinc finger protein 272
Alias_symbol (synonym)HZF8
Other alias
HGNC (Hugo) ZNF460
LocusID (NCBI) 10794
Atlas_Id 76168
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 57279967 and ends at 57293568 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PPP1R12C (19q13.42) / ZNF460 (19q13.43)ZNF460 (19q13.43) / ELSPBP1 (19q13.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF460   21628
Cards
Entrez_Gene (NCBI)ZNF460  10794  zinc finger protein 460
AliasesHZF8; ZNF272
GeneCards (Weizmann)ZNF460
Ensembl hg19 (Hinxton)ENSG00000197714 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197714 [Gene_View]  chr19:57279967-57293568 [Contig_View]  ZNF460 [Vega]
ICGC DataPortalENSG00000197714
TCGA cBioPortalZNF460
AceView (NCBI)ZNF460
Genatlas (Paris)ZNF460
WikiGenes10794
SOURCE (Princeton)ZNF460
Genetics Home Reference (NIH)ZNF460
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF460  -     chr19:57279967-57293568 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF460  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblZNF460 - 19q13.43 [CytoView hg19]  ZNF460 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIZNF460 [Mapview hg19]  ZNF460 [Mapview hg38]
OMIM604755   
Gene and transcription
Genbank (Entrez)AK074582 AK090816 AK292144 AK298106 AW293116
RefSeq transcript (Entrez)NM_001330622 NM_006635
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF460
Cluster EST : UnigeneHs.99971 [ NCBI ]
CGAP (NCI)Hs.99971
Alternative Splicing GalleryENSG00000197714
Gene ExpressionZNF460 [ NCBI-GEO ]   ZNF460 [ EBI - ARRAY_EXPRESS ]   ZNF460 [ SEEK ]   ZNF460 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF460 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10794
GTEX Portal (Tissue expression)ZNF460
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14592   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14592  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14592
Splice isoforms : SwissVarQ14592
PhosPhoSitePlusQ14592
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF460
DMDM Disease mutations10794
Blocks (Seattle)ZNF460
SuperfamilyQ14592
Human Protein AtlasENSG00000197714
Peptide AtlasQ14592
HPRD06885
IPIIPI00397734   IPI01014521   
Protein Interaction databases
DIP (DOE-UCLA)Q14592
IntAct (EBI)Q14592
FunCoupENSG00000197714
BioGRIDZNF460
STRING (EMBL)ZNF460
ZODIACZNF460
Ontologies - Pathways
QuickGOQ14592
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF460
Atlas of Cancer Signalling NetworkZNF460
Wikipedia pathwaysZNF460
Orthology - Evolution
OrthoDB10794
GeneTree (enSembl)ENSG00000197714
Phylogenetic Trees/Animal Genes : TreeFamZNF460
HOVERGENQ14592
HOGENOMQ14592
Homologs : HomoloGeneZNF460
Homology/Alignments : Family Browser (UCSC)ZNF460
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF460 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF460
dbVarZNF460
ClinVarZNF460
1000_GenomesZNF460 
Exome Variant ServerZNF460
ExAC (Exome Aggregation Consortium)ZNF460 (select the gene name)
Genetic variants : HAPMAP10794
Genomic Variants (DGV)ZNF460 [DGVbeta]
DECIPHERZNF460 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF460 
Mutations
ICGC Data PortalZNF460 
TCGA Data PortalZNF460 
Broad Tumor PortalZNF460
OASIS PortalZNF460 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF460  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF460
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF460
DgiDB (Drug Gene Interaction Database)ZNF460
DoCM (Curated mutations)ZNF460 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF460 (select a term)
intoGenZNF460
Cancer3DZNF460(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604755   
Orphanet
MedgenZNF460
Genetic Testing Registry ZNF460
NextProtQ14592 [Medical]
TSGene10794
GENETestsZNF460
Target ValidationZNF460
Huge Navigator ZNF460 [HugePedia]
snp3D : Map Gene to Disease10794
BioCentury BCIQZNF460
ClinGenZNF460
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10794
Chemical/Pharm GKB GenePA37642
Clinical trialZNF460
Miscellaneous
canSAR (ICR)ZNF460 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF460
EVEXZNF460
GoPubMedZNF460
iHOPZNF460
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:29 CEST 2017

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