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ZNF462 (zinc finger protein 462)

Identity

Alias (NCBI)WSKA
ZFPIP
Zfp462
HGNC (Hugo) ZNF462
HGNC Alias symbDKFZP762N2316
KIAA1803
Zfp462
LocusID (NCBI) 58499
Atlas_Id 57709
Location 9q31.2  [Link to chromosome band 9q31]
Location_base_pair Starts at 106863166 and ends at 107013634 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ASXL2 (2p23.3) / ZNF462 (9q31.2)CACNA1I (22q13.1) / ZNF462 (9q31.2)GPR161 (1q24.2) / ZNF462 (9q31.2)
PRDX2 (19p13.2) / ZNF462 (9q31.2)RUFY3 (4q13.3) / ZNF462 (9q31.2)ZNF462 (9q31.2) / ARL17A (17q21.31)
ZNF462 (9q31.2) / DNAJC1 (10p12.31)ZNF462 (9q31.2) / RIMS2 (8q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ZNF462   21684
Cards
Entrez_Gene (NCBI)ZNF462    zinc finger protein 462
AliasesWSKA; ZFPIP; Zfp462
GeneCards (Weizmann)ZNF462
Ensembl hg19 (Hinxton)ENSG00000148143 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148143 [Gene_View]  ENSG00000148143 [Sequence]  chr9:106863166-107013634 [Contig_View]  ZNF462 [Vega]
ICGC DataPortalENSG00000148143
TCGA cBioPortalZNF462
AceView (NCBI)ZNF462
Genatlas (Paris)ZNF462
SOURCE (Princeton)ZNF462
Genetics Home Reference (NIH)ZNF462
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF462  -     chr9:106863166-107013634 +  9q31.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF462  -     9q31.2   [Description]    (hg19-Feb_2009)
GoldenPathZNF462 - 9q31.2 [CytoView hg19]  ZNF462 - 9q31.2 [CytoView hg38]
ImmunoBaseENSG00000148143
genome Data Viewer NCBIZNF462 [Mapview hg19]  
OMIM617371   618619   
Gene and transcription
Genbank (Entrez)AB058706 AK027866 AK127803 AK302007 AL359561
RefSeq transcript (Entrez)NM_001347997 NM_021224
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF462
Alternative Splicing GalleryENSG00000148143
Gene ExpressionZNF462 [ NCBI-GEO ]   ZNF462 [ EBI - ARRAY_EXPRESS ]   ZNF462 [ SEEK ]   ZNF462 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF462 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF462 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)58499
GTEX Portal (Tissue expression)ZNF462
Human Protein AtlasENSG00000148143-ZNF462 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96JM2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96JM2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96JM2
Splice isoforms : SwissVarQ96JM2
PhosPhoSitePlusQ96JM2
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF462
Blocks (Seattle)ZNF462
PDB (RSDB)1X6F   
PDB Europe1X6F   
PDB (PDBSum)1X6F   
PDB (IMB)1X6F   
Structural Biology KnowledgeBase1X6F   
SCOP (Structural Classification of Proteins)1X6F   
CATH (Classification of proteins structures)1X6F   
SuperfamilyQ96JM2
Human Protein Atlas [tissue]ENSG00000148143-ZNF462 [tissue]
Peptide AtlasQ96JM2
IPIIPI00852632   IPI00915450   IPI00792933   IPI00552912   
Protein Interaction databases
DIP (DOE-UCLA)Q96JM2
IntAct (EBI)Q96JM2
BioGRIDZNF462
STRING (EMBL)ZNF462
ZODIACZNF462
Ontologies - Pathways
QuickGOQ96JM2
Ontology : AmiGODNA binding  protein binding  nucleus  chromatin organization  regulation of gene expression  negative regulation of DNA binding  positive regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  chromatin organization  regulation of gene expression  negative regulation of DNA binding  positive regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF462
Atlas of Cancer Signalling NetworkZNF462
Wikipedia pathwaysZNF462
Orthology - Evolution
OrthoDB58499
GeneTree (enSembl)ENSG00000148143
Phylogenetic Trees/Animal Genes : TreeFamZNF462
HOGENOMQ96JM2
Homologs : HomoloGeneZNF462
Homology/Alignments : Family Browser (UCSC)ZNF462
Gene fusions - Rearrangements
Fusion : QuiverZNF462
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF462 [hg38]
dbVarZNF462
ClinVarZNF462
MonarchZNF462
1000_GenomesZNF462 
Exome Variant ServerZNF462
GNOMAD BrowserENSG00000148143
Varsome BrowserZNF462
Genomic Variants (DGV)ZNF462 [DGVbeta]
DECIPHERZNF462 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF462 
Mutations
ICGC Data PortalZNF462 
TCGA Data PortalZNF462 
Broad Tumor PortalZNF462
OASIS PortalZNF462 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF462  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF462
Mutations and Diseases : HGMDZNF462
BioMutasearch ZNF462
DgiDB (Drug Gene Interaction Database)ZNF462
DoCM (Curated mutations)ZNF462 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF462 (select a term)
intoGenZNF462
Cancer3DZNF462(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617371    618619   
Orphanet
DisGeNETZNF462
MedgenZNF462
Genetic Testing Registry ZNF462
NextProtQ96JM2 [Medical]
GENETestsZNF462
Target ValidationZNF462
Huge Navigator ZNF462 [HugePedia]
ClinGenZNF462
Clinical trials, drugs, therapy
MyCancerGenomeZNF462
Protein Interactions : CTD
Pharm GKB GenePA134949139
PharosQ96JM2
Clinical trialZNF462
Miscellaneous
canSAR (ICR)ZNF462 (select the gene name)
HarmonizomeZNF462
DataMed IndexZNF462
Probes
Litterature
PubMed39 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF462
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 25 19:53:57 CET 2021

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