ZNF473 (zinc finger protein 473)

2014-11-01  

Identity

HGNC
ZNF473
LOCATION
19q13.33
LOCUSID
25888
ALIAS
ZFP100,ZN473
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 25888
MIM: 617908
HGNC: 23239
Ensembl: ENSG00000142528

Variants:

dbSNP: 25888
ClinVar: 25888
TCGA: ENSG00000142528
COSMIC: ZNF473

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000142528ENST00000270617Q8WTR7
ENSG00000142528ENST00000270617A0A024QZI1
ENSG00000142528ENST00000391821Q8WTR7
ENSG00000142528ENST00000391821A0A024QZI1
ENSG00000142528ENST00000445728F8WEC7
ENSG00000142528ENST00000594968M0R2N2
ENSG00000142528ENST00000595661Q8WTR7
ENSG00000142528ENST00000595661A0A024QZI1
ENSG00000142528ENST00000598809M0R032
ENSG00000142528ENST00000599155M0QZY7
ENSG00000142528ENST00000601364M0R123

Expression (GTEx)

0
5
10
15
20
25
30
35
40
45
50
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
Generic Transcription PathwayREACTOMER-HSA-212436
RNA Polymerase II TranscriptionREACTOMER-HSA-73857
RNA Polymerase II Transcription TerminationREACTOMER-HSA-73856
Cleavage of Growing Transcript in the Termination RegionREACTOMER-HSA-109688
Processing of Capped Intronless Pre-mRNAREACTOMER-HSA-75067
SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAsREACTOMER-HSA-77588
SLBP independent Processing of Histone Pre-mRNAsREACTOMER-HSA-111367

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
169147502006ZFP100, a component of the active U7 snRNP limiting for histone pre-mRNA processing, is required for entry into S phase.19

Citation

Dessen P

ZNF473 (zinc finger protein 473)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/76175/znf473