| Nomenclature |
|---|
| HGNC (Hugo) | ZNF487 23488 |
| Cards |
|---|
| Entrez_Gene (NCBI) | ZNF487 zinc finger protein 487 |
| Aliases | KRBO1; ZNF487P |
| GeneCards (Weizmann) | ZNF487 |
| Ensembl hg19 (Hinxton) | ENSG00000243660 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000243660 [Gene_View] ENSG00000243660 [Sequence] chr10:43437111-43483181 [Contig_View] ZNF487 [Vega] |
| ICGC DataPortal | ENSG00000243660 |
| TCGA cBioPortal | ZNF487 |
| AceView (NCBI) | ZNF487 |
| Genatlas (Paris) | ZNF487 |
| SOURCE (Princeton) | ZNF487 |
| Genetics Home Reference (NIH) | ZNF487 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | ZNF487 - chr10:43437111-43483181 + 10q11.21 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | ZNF487 - 10q11.21 [Description] (hg19-Feb_2009) |
| GoldenPath | ZNF487 - 10q11.21 [CytoView hg19] ZNF487 - 10q11.21 [CytoView hg38] |
| ImmunoBase | ENSG00000243660 |
| Genome Data Viewer NCBI | ZNF487 [Mapview hg19] |
| Gene and transcription |
|---|
| Genbank (Entrez) | AK302442 |
| RefSeq transcript (Entrez) | NM_001355444 NM_001355445 NM_001355446 NM_001355447 NM_001355448 NM_001355449 NM_001355450 |
| Consensus coding sequences : CCDS (NCBI) | ZNF487 |
| Gene Expression | ZNF487 [ NCBI-GEO ] ZNF487 [ EBI - ARRAY_EXPRESS ]
ZNF487 [ SEEK ] ZNF487 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | ZNF487 [ Firebrowse - Broad ] |
| Genevisible | Expression of ZNF487 in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 642819 |
| GTEX Portal (Tissue expression) | ZNF487 |
| Human Protein Atlas | ENSG00000243660-ZNF487 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | B1APH4 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | B1APH4 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | B1APH4 |
| PhosPhoSitePlus | B1APH4 |
| Domaine pattern : Prosite (Expaxy) | KRAB (PS50805) ZINC_FINGER_C2H2_1 (PS00028) ZINC_FINGER_C2H2_2 (PS50157) |
| Domains : Interpro (EBI) | KRAB KRAB_dom_sf Znf_C2H2_sf Znf_C2H2_type |
| Domain families : Pfam (Sanger) | KRAB (PF01352) zf-C2H2 (PF00096) |
| Domain families : Pfam (NCBI) | pfam01352 pfam00096 |
| Domain families : Smart (EMBL) | KRAB (SM00349) ZnF_C2H2 (SM00355) |
| Conserved Domain (NCBI) | ZNF487 |
| Superfamily | B1APH4 |
| AlphaFold pdb e-kb | B1APH4 |
| Human Protein Atlas [tissue] | ENSG00000243660-ZNF487 [tissue] |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | B1APH4 |
| IntAct (EBI) | B1APH4 |
| BioGRID | ZNF487 |
| STRING (EMBL) | ZNF487 |
| ZODIAC | ZNF487 |
| Ontologies - Pathways |
|---|
| QuickGO | B1APH4 |
| Ontology : AmiGO | negative regulation of transcription by RNA polymerase II chromatin RNA polymerase II transcription regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific nucleus regulation of transcription by RNA polymerase II metal ion binding |
| Ontology : EGO-EBI | negative regulation of transcription by RNA polymerase II chromatin RNA polymerase II transcription regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription repressor activity, RNA polymerase II-specific nucleus regulation of transcription by RNA polymerase II metal ion binding |
| NDEx Network | ZNF487 |
| Atlas of Cancer Signalling Network | ZNF487 |
| Wikipedia pathways | ZNF487 |
| Orthology - Evolution |
|---|
| OrthoDB | 642819 |
| GeneTree (enSembl) | ENSG00000243660 |
| Phylogenetic Trees/Animal Genes : TreeFam | ZNF487 |
| Homologs : HomoloGene | ZNF487 |
| Homology/Alignments : Family Browser (UCSC) | ZNF487 |
| Gene fusions - Rearrangements |
|---|
| Fusion : Quiver | ZNF487 |
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | ZNF487 [hg38] |
| dbSNP Single Nucleotide Polymorphism (NCBI) | ZNF487 |
| dbVar | ZNF487 |
| ClinVar | ZNF487 |
| Monarch | ZNF487 |
| 1000_Genomes | ZNF487 |
| Exome Variant Server | ZNF487 |
| GNOMAD Browser | ENSG00000243660 |
| Varsome Browser | ZNF487 |
| ACMG | ZNF487 variants |
| Varity | B1APH4 |
| Genomic Variants (DGV) | ZNF487 [DGVbeta] |
| DECIPHER | ZNF487 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | ZNF487 |
| Mutations |
|---|
| ICGC Data Portal | ZNF487 |
| TCGA Data Portal | ZNF487 |
| Broad Tumor Portal | ZNF487 |
| OASIS Portal | ZNF487 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | ZNF487 [overview] [genome browser] [tissue] [distribution] |
| Somatic Mutations in Cancer : COSMIC3D | ZNF487 |
| Mutations and Diseases : HGMD | ZNF487 |
| LOVD (Leiden Open Variation Database) | [gene] [transcripts] [variants] |
| BioMuta | ZNF487 |
| DgiDB (Drug Gene Interaction Database) | ZNF487 |
| DoCM (Curated mutations) | ZNF487 |
| CIViC (Clinical Interpretations of Variants in Cancer) | ZNF487 |
| Cancer3D | ZNF487 |
| Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | |
| Orphanet | |
| DisGeNET | ZNF487 |
| Medgen | ZNF487 |
| Genetic Testing Registry | ZNF487
|
| NextProt | B1APH4 [Medical] |
| GENETests | ZNF487 |
| Target Validation | ZNF487 |
| Huge Navigator |
ZNF487 [HugePedia] |
| ClinGen | ZNF487 |
| Clinical trials, drugs, therapy |
|---|
| MyCancerGenome | ZNF487 |
| Protein Interactions : CTD | ZNF487 |
| Pharm GKB Gene | PA143485525 |
| Pharos | B1APH4 |
| Clinical trial | ZNF487 |
| Miscellaneous |
|---|
| canSAR (ICR) | ZNF487 |
| Harmonizome | ZNF487 |
| DataMed Index | ZNF487 |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 2 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| EVEX | ZNF487 |
