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ZNF491 (zinc finger protein 491)

Identity

Alias_symbol (synonym)FLJ34791
Other alias-
HGNC (Hugo) ZNF491
LocusID (NCBI) 126069
Atlas_Id 76185
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 11798576 and ends at 11808491 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF491   23706
Cards
Entrez_Gene (NCBI)ZNF491  126069  zinc finger protein 491
Aliases
GeneCards (Weizmann)ZNF491
Ensembl hg19 (Hinxton)ENSG00000177599 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177599 [Gene_View]  chr19:11798576-11808491 [Contig_View]  ZNF491 [Vega]
ICGC DataPortalENSG00000177599
TCGA cBioPortalZNF491
AceView (NCBI)ZNF491
Genatlas (Paris)ZNF491
WikiGenes126069
SOURCE (Princeton)ZNF491
Genetics Home Reference (NIH)ZNF491
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF491  -     chr19:11798576-11808491 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF491  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblZNF491 - 19p13.2 [CytoView hg19]  ZNF491 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF491 [Mapview hg19]  ZNF491 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA083980 AK092110 AK096593 AK297479 BC101590
RefSeq transcript (Entrez)NM_152356
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF491
Cluster EST : UnigeneHs.631634 [ NCBI ]
CGAP (NCI)Hs.631634
Alternative Splicing GalleryENSG00000177599
Gene ExpressionZNF491 [ NCBI-GEO ]   ZNF491 [ EBI - ARRAY_EXPRESS ]   ZNF491 [ SEEK ]   ZNF491 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF491 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)126069
GTEX Portal (Tissue expression)ZNF491
Human Protein AtlasENSG00000177599-ZNF491 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8L2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8L2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8L2
Splice isoforms : SwissVarQ8N8L2
PhosPhoSitePlusQ8N8L2
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF491
DMDM Disease mutations126069
Blocks (Seattle)ZNF491
SuperfamilyQ8N8L2
Human Protein Atlas [tissue]ENSG00000177599-ZNF491 [tissue]
Peptide AtlasQ8N8L2
HPRD15803
IPIIPI00927611   IPI00910988   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8L2
IntAct (EBI)Q8N8L2
FunCoupENSG00000177599
BioGRIDZNF491
STRING (EMBL)ZNF491
ZODIACZNF491
Ontologies - Pathways
QuickGOQ8N8L2
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF491
Atlas of Cancer Signalling NetworkZNF491
Wikipedia pathwaysZNF491
Orthology - Evolution
OrthoDB126069
GeneTree (enSembl)ENSG00000177599
Phylogenetic Trees/Animal Genes : TreeFamZNF491
HOVERGENQ8N8L2
HOGENOMQ8N8L2
Homologs : HomoloGeneZNF491
Homology/Alignments : Family Browser (UCSC)ZNF491
Gene fusions - Rearrangements
Fusion: Tumor Portal ZNF491
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF491 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF491
dbVarZNF491
ClinVarZNF491
1000_GenomesZNF491 
Exome Variant ServerZNF491
ExAC (Exome Aggregation Consortium)ENSG00000177599
GNOMAD BrowserENSG00000177599
Genetic variants : HAPMAP126069
Genomic Variants (DGV)ZNF491 [DGVbeta]
DECIPHERZNF491 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF491 
Mutations
ICGC Data PortalZNF491 
TCGA Data PortalZNF491 
Broad Tumor PortalZNF491
OASIS PortalZNF491 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF491  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF491
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF491
DgiDB (Drug Gene Interaction Database)ZNF491
DoCM (Curated mutations)ZNF491 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF491 (select a term)
intoGenZNF491
Cancer3DZNF491(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF491
Genetic Testing Registry ZNF491
NextProtQ8N8L2 [Medical]
TSGene126069
GENETestsZNF491
Target ValidationZNF491
Huge Navigator ZNF491 [HugePedia]
snp3D : Map Gene to Disease126069
BioCentury BCIQZNF491
ClinGenZNF491
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD126069
Chemical/Pharm GKB GenePA134982286
Clinical trialZNF491
Miscellaneous
canSAR (ICR)ZNF491 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF491
EVEXZNF491
GoPubMedZNF491
iHOPZNF491
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:37:13 CET 2017

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