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ZNF492 (zinc finger protein 492)

Identity

Alias (NCBI)ZNF115
HGNC (Hugo) ZNF492
HGNC Alias symbKIAA1473
HGNC Previous nameZNF115
HGNC Previous namezinc finger protein 115 (Y20)
LocusID (NCBI) 57615
Atlas_Id 54807
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 22634324 and ends at 22667671 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
UNC13A (19p13.11)::ZNF492 (19p12)ZNF492 (19p12)::NLRP5 (19q13.43)ZNF492 19p12::NLRP5 19q13.43

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF492   23707
Cards
Entrez_Gene (NCBI)ZNF492    zinc finger protein 492
AliasesZNF115
GeneCards (Weizmann)ZNF492
Ensembl hg19 (Hinxton)ENSG00000229676 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229676 [Gene_View]  ENSG00000229676 [Sequence]  chr19:22634324-22667671 [Contig_View]  ZNF492 [Vega]
ICGC DataPortalENSG00000229676
TCGA cBioPortalZNF492
AceView (NCBI)ZNF492
Genatlas (Paris)ZNF492
SOURCE (Princeton)ZNF492
Genetics Home Reference (NIH)ZNF492
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF492  -     chr19:22634324-22667671 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF492  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF492 - 19p12 [CytoView hg19]  ZNF492 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000229676
Genome Data Viewer NCBIZNF492 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB040906 BC110575 BP871882
RefSeq transcript (Entrez)NM_020855
Consensus coding sequences : CCDS (NCBI)ZNF492
Gene ExpressionZNF492 [ NCBI-GEO ]   ZNF492 [ EBI - ARRAY_EXPRESS ]   ZNF492 [ SEEK ]   ZNF492 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF492 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF492 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57615
GTEX Portal (Tissue expression)ZNF492
Human Protein AtlasENSG00000229676-ZNF492 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P255   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P255  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P255
PhosPhoSitePlusQ9P255
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF492
SuperfamilyQ9P255
AlphaFold pdb e-kbQ9P255   
Human Protein Atlas [tissue]ENSG00000229676-ZNF492 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q9P255
IntAct (EBI)Q9P255
BioGRIDZNF492
STRING (EMBL)ZNF492
ZODIACZNF492
Ontologies - Pathways
QuickGOQ9P255
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF492
Atlas of Cancer Signalling NetworkZNF492
Wikipedia pathwaysZNF492
Orthology - Evolution
OrthoDB57615
GeneTree (enSembl)ENSG00000229676
Phylogenetic Trees/Animal Genes : TreeFamZNF492
Homologs : HomoloGeneZNF492
Homology/Alignments : Family Browser (UCSC)ZNF492
Gene fusions - Rearrangements
Fusion : MitelmanUNC13A::ZNF492 [19p13.11/19p12]  
Fusion : MitelmanZNF492::NLRP5 [19p12/19q13.43]  
Fusion : QuiverZNF492
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF492 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF492
dbVarZNF492
ClinVarZNF492
MonarchZNF492
1000_GenomesZNF492 
Exome Variant ServerZNF492
GNOMAD BrowserENSG00000229676
Varsome BrowserZNF492
ACMGZNF492 variants
VarityQ9P255
Genomic Variants (DGV)ZNF492 [DGVbeta]
DECIPHERZNF492 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF492 
Mutations
ICGC Data PortalZNF492 
TCGA Data PortalZNF492 
Broad Tumor PortalZNF492
OASIS PortalZNF492 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF492  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF492
Mutations and Diseases : HGMDZNF492
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF492
DgiDB (Drug Gene Interaction Database)ZNF492
DoCM (Curated mutations)ZNF492
CIViC (Clinical Interpretations of Variants in Cancer)ZNF492
Cancer3DZNF492
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF492
MedgenZNF492
Genetic Testing Registry ZNF492
NextProtQ9P255 [Medical]
GENETestsZNF492
Target ValidationZNF492
Huge Navigator ZNF492 [HugePedia]
ClinGenZNF492
Clinical trials, drugs, therapy
MyCancerGenomeZNF492
Protein Interactions : CTDZNF492
Pharm GKB GenePA134940205
PharosQ9P255
Clinical trialZNF492
Miscellaneous
canSAR (ICR)ZNF492
HarmonizomeZNF492
ARCHS4ZNF492
DataMed IndexZNF492
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF492
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:07:40 CET 2022

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