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ZNF502 (zinc finger protein 502)

Identity

Alias_symbol (synonym)FLJ14855
FLJ12515
Other alias-
HGNC (Hugo) ZNF502
LocusID (NCBI) 91392
Atlas_Id 76190
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 44712643 and ends at 44723831 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF502   23718
Cards
Entrez_Gene (NCBI)ZNF502  91392  zinc finger protein 502
Aliases
GeneCards (Weizmann)ZNF502
Ensembl hg19 (Hinxton)ENSG00000196653 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196653 [Gene_View]  chr3:44712643-44723831 [Contig_View]  ZNF502 [Vega]
ICGC DataPortalENSG00000196653
TCGA cBioPortalZNF502
AceView (NCBI)ZNF502
Genatlas (Paris)ZNF502
WikiGenes91392
SOURCE (Princeton)ZNF502
Genetics Home Reference (NIH)ZNF502
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF502  -     chr3:44712643-44723831 +  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF502  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblZNF502 - 3p21.31 [CytoView hg19]  ZNF502 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBIZNF502 [Mapview hg19]  ZNF502 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK022577 AK027761 BC028377 DA511196 DA823790
RefSeq transcript (Entrez)NM_001134440 NM_001134441 NM_001134442 NM_001282880 NM_033210
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF502
Cluster EST : UnigeneHs.224843 [ NCBI ]
CGAP (NCI)Hs.224843
Alternative Splicing GalleryENSG00000196653
Gene ExpressionZNF502 [ NCBI-GEO ]   ZNF502 [ EBI - ARRAY_EXPRESS ]   ZNF502 [ SEEK ]   ZNF502 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF502 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91392
GTEX Portal (Tissue expression)ZNF502
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TBZ5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TBZ5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TBZ5
Splice isoforms : SwissVarQ8TBZ5
PhosPhoSitePlusQ8TBZ5
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam00096    pfam13912   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF502
DMDM Disease mutations91392
Blocks (Seattle)ZNF502
SuperfamilyQ8TBZ5
Human Protein AtlasENSG00000196653
Peptide AtlasQ8TBZ5
HPRD15810
IPIIPI00152323   IPI00165519   
Protein Interaction databases
DIP (DOE-UCLA)Q8TBZ5
IntAct (EBI)Q8TBZ5
FunCoupENSG00000196653
BioGRIDZNF502
STRING (EMBL)ZNF502
ZODIACZNF502
Ontologies - Pathways
QuickGOQ8TBZ5
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  positive regulation by host of viral release from host cell  positive regulation by host of viral process  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  positive regulation by host of viral release from host cell  positive regulation by host of viral process  metal ion binding  
NDEx NetworkZNF502
Atlas of Cancer Signalling NetworkZNF502
Wikipedia pathwaysZNF502
Orthology - Evolution
OrthoDB91392
GeneTree (enSembl)ENSG00000196653
Phylogenetic Trees/Animal Genes : TreeFamZNF502
HOVERGENQ8TBZ5
HOGENOMQ8TBZ5
Homologs : HomoloGeneZNF502
Homology/Alignments : Family Browser (UCSC)ZNF502
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF502 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF502
dbVarZNF502
ClinVarZNF502
1000_GenomesZNF502 
Exome Variant ServerZNF502
ExAC (Exome Aggregation Consortium)ZNF502 (select the gene name)
Genetic variants : HAPMAP91392
Genomic Variants (DGV)ZNF502 [DGVbeta]
DECIPHERZNF502 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF502 
Mutations
ICGC Data PortalZNF502 
TCGA Data PortalZNF502 
Broad Tumor PortalZNF502
OASIS PortalZNF502 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF502  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF502
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF502
DgiDB (Drug Gene Interaction Database)ZNF502
DoCM (Curated mutations)ZNF502 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF502 (select a term)
intoGenZNF502
Cancer3DZNF502(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF502
Genetic Testing Registry ZNF502
NextProtQ8TBZ5 [Medical]
TSGene91392
GENETestsZNF502
Target ValidationZNF502
Huge Navigator ZNF502 [HugePedia]
snp3D : Map Gene to Disease91392
BioCentury BCIQZNF502
ClinGenZNF502
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91392
Chemical/Pharm GKB GenePA134866656
Clinical trialZNF502
Miscellaneous
canSAR (ICR)ZNF502 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF502
EVEXZNF502
GoPubMedZNF502
iHOPZNF502
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:44:50 CEST 2017

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