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ZNF503-AS2 (ZNF503 antisense RNA 2)

Identity

Alias_namesC10orf41
NCRNA00245
chromosome 10 open reading frame 41
non-protein coding RNA 245
ZNF503 antisense RNA 2 (non-protein coding)
Other alias
HGNC (Hugo) ZNF503-AS2
LocusID (NCBI) 100131213
Atlas_Id 76193
Location 10q22.2  [Link to chromosome band 10q22]
Location_base_pair Starts at 75401528 and ends at 75408982 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
C10orf11 (10q22.2) / ZNF503-AS2 (10q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF503-AS2   23525
Cards
Entrez_Gene (NCBI)ZNF503-AS2  100131213  ZNF503 antisense RNA 2
AliasesC10orf41; NCRNA00245
GeneCards (Weizmann)ZNF503-AS2
Ensembl hg19 (Hinxton)ENSG00000237149 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000237149 [Gene_View]  chr10:75401528-75408982 [Contig_View]  ZNF503-AS2 [Vega]
ICGC DataPortalENSG00000237149
TCGA cBioPortalZNF503-AS2
AceView (NCBI)ZNF503-AS2
Genatlas (Paris)ZNF503-AS2
WikiGenes100131213
SOURCE (Princeton)ZNF503-AS2
Genetics Home Reference (NIH)ZNF503-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF503-AS2  -     chr10:75401528-75408982 +  10q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF503-AS2  -     10q22.2   [Description]    (hg19-Feb_2009)
EnsemblZNF503-AS2 - 10q22.2 [CytoView hg19]  ZNF503-AS2 - 10q22.2 [CytoView hg38]
Mapping of homologs : NCBIZNF503-AS2 [Mapview hg19]  ZNF503-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024492 AW449476 BC017426 BC029963 BE392199
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF503-AS2
Cluster EST : UnigeneHs.534598 [ NCBI ]
CGAP (NCI)Hs.534598
Alternative Splicing GalleryENSG00000237149
Gene ExpressionZNF503-AS2 [ NCBI-GEO ]   ZNF503-AS2 [ EBI - ARRAY_EXPRESS ]   ZNF503-AS2 [ SEEK ]   ZNF503-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF503-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100131213
GTEX Portal (Tissue expression)ZNF503-AS2
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NEH8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NEH8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NEH8
Splice isoforms : SwissVarA6NEH8
PhosPhoSitePlusA6NEH8
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZNF503-AS2
DMDM Disease mutations100131213
Blocks (Seattle)ZNF503-AS2
SuperfamilyA6NEH8
Human Protein AtlasENSG00000237149
Peptide AtlasA6NEH8
IPIIPI00174164   IPI00011315   
Protein Interaction databases
DIP (DOE-UCLA)A6NEH8
IntAct (EBI)A6NEH8
FunCoupENSG00000237149
BioGRIDZNF503-AS2
STRING (EMBL)ZNF503-AS2
ZODIACZNF503-AS2
Ontologies - Pathways
QuickGOA6NEH8
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkZNF503-AS2
Atlas of Cancer Signalling NetworkZNF503-AS2
Wikipedia pathwaysZNF503-AS2
Orthology - Evolution
OrthoDB100131213
GeneTree (enSembl)ENSG00000237149
Phylogenetic Trees/Animal Genes : TreeFamZNF503-AS2
HOVERGENA6NEH8
HOGENOMA6NEH8
Homologs : HomoloGeneZNF503-AS2
Homology/Alignments : Family Browser (UCSC)ZNF503-AS2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF503-AS2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF503-AS2
dbVarZNF503-AS2
ClinVarZNF503-AS2
1000_GenomesZNF503-AS2 
Exome Variant ServerZNF503-AS2
ExAC (Exome Aggregation Consortium)ZNF503-AS2 (select the gene name)
Genetic variants : HAPMAP100131213
Genomic Variants (DGV)ZNF503-AS2 [DGVbeta]
DECIPHERZNF503-AS2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF503-AS2 
Mutations
ICGC Data PortalZNF503-AS2 
TCGA Data PortalZNF503-AS2 
Broad Tumor PortalZNF503-AS2
OASIS PortalZNF503-AS2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF503-AS2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF503-AS2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF503-AS2
DgiDB (Drug Gene Interaction Database)ZNF503-AS2
DoCM (Curated mutations)ZNF503-AS2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF503-AS2 (select a term)
intoGenZNF503-AS2
Cancer3DZNF503-AS2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF503-AS2
Genetic Testing Registry ZNF503-AS2
NextProtA6NEH8 [Medical]
TSGene100131213
GENETestsZNF503-AS2
Target ValidationZNF503-AS2
Huge Navigator ZNF503-AS2 [HugePedia]
snp3D : Map Gene to Disease100131213
BioCentury BCIQZNF503-AS2
ClinGenZNF503-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100131213
Chemical/Pharm GKB GenePA165548984
Clinical trialZNF503-AS2
Miscellaneous
canSAR (ICR)ZNF503-AS2 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF503-AS2
EVEXZNF503-AS2
GoPubMedZNF503-AS2
iHOPZNF503-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:34 CEST 2017

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