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ZNF507 (zinc finger protein 507)

Identity

Alias_symbol (synonym)KIAA1084
Other alias-
HGNC (Hugo) ZNF507
LocusID (NCBI) 22847
Atlas_Id 76195
Location 19q13.11  [Link to chromosome band 19q13]
Location_base_pair Starts at 32345608 and ends at 32387667 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LRP5 (11q13.2) / ZNF507 (19q13.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF507   23783
Cards
Entrez_Gene (NCBI)ZNF507  22847  zinc finger protein 507
Aliases
GeneCards (Weizmann)ZNF507
Ensembl hg19 (Hinxton)ENSG00000168813 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168813 [Gene_View]  chr19:32345608-32387667 [Contig_View]  ZNF507 [Vega]
ICGC DataPortalENSG00000168813
TCGA cBioPortalZNF507
AceView (NCBI)ZNF507
Genatlas (Paris)ZNF507
WikiGenes22847
SOURCE (Princeton)ZNF507
Genetics Home Reference (NIH)ZNF507
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF507  -     chr19:32345608-32387667 +  19q13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF507  -     19q13.11   [Description]    (hg19-Feb_2009)
EnsemblZNF507 - 19q13.11 [CytoView hg19]  ZNF507 - 19q13.11 [CytoView hg38]
Mapping of homologs : NCBIZNF507 [Mapview hg19]  ZNF507 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB029007 AK126703 AK130905 AK292526 AL713775
RefSeq transcript (Entrez)NM_001136156 NM_014910
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF507
Cluster EST : UnigeneHs.205392 [ NCBI ]
CGAP (NCI)Hs.205392
Alternative Splicing GalleryENSG00000168813
Gene ExpressionZNF507 [ NCBI-GEO ]   ZNF507 [ EBI - ARRAY_EXPRESS ]   ZNF507 [ SEEK ]   ZNF507 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF507 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22847
GTEX Portal (Tissue expression)ZNF507
Human Protein AtlasENSG00000168813-ZNF507 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TCN5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TCN5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TCN5
Splice isoforms : SwissVarQ8TCN5
PhosPhoSitePlusQ8TCN5
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF507
DMDM Disease mutations22847
Blocks (Seattle)ZNF507
SuperfamilyQ8TCN5
Human Protein Atlas [tissue]ENSG00000168813-ZNF507 [tissue]
Peptide AtlasQ8TCN5
HPRD11722
IPIIPI01009521   IPI00479220   IPI00401988   
Protein Interaction databases
DIP (DOE-UCLA)Q8TCN5
IntAct (EBI)Q8TCN5
FunCoupENSG00000168813
BioGRIDZNF507
STRING (EMBL)ZNF507
ZODIACZNF507
Ontologies - Pathways
QuickGOQ8TCN5
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF507
Atlas of Cancer Signalling NetworkZNF507
Wikipedia pathwaysZNF507
Orthology - Evolution
OrthoDB22847
GeneTree (enSembl)ENSG00000168813
Phylogenetic Trees/Animal Genes : TreeFamZNF507
HOVERGENQ8TCN5
HOGENOMQ8TCN5
Homologs : HomoloGeneZNF507
Homology/Alignments : Family Browser (UCSC)ZNF507
Gene fusions - Rearrangements
Tumor Fusion PortalZNF507
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF507 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF507
dbVarZNF507
ClinVarZNF507
1000_GenomesZNF507 
Exome Variant ServerZNF507
ExAC (Exome Aggregation Consortium)ENSG00000168813
GNOMAD BrowserENSG00000168813
Genetic variants : HAPMAP22847
Genomic Variants (DGV)ZNF507 [DGVbeta]
DECIPHERZNF507 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF507 
Mutations
ICGC Data PortalZNF507 
TCGA Data PortalZNF507 
Broad Tumor PortalZNF507
OASIS PortalZNF507 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF507  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF507
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF507
DgiDB (Drug Gene Interaction Database)ZNF507
DoCM (Curated mutations)ZNF507 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF507 (select a term)
intoGenZNF507
Cancer3DZNF507(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF507
MedgenZNF507
Genetic Testing Registry ZNF507
NextProtQ8TCN5 [Medical]
TSGene22847
GENETestsZNF507
Target ValidationZNF507
Huge Navigator ZNF507 [HugePedia]
snp3D : Map Gene to Disease22847
BioCentury BCIQZNF507
ClinGenZNF507
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22847
Chemical/Pharm GKB GenePA134917055
Clinical trialZNF507
Miscellaneous
canSAR (ICR)ZNF507 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF507
EVEXZNF507
GoPubMedZNF507
iHOPZNF507
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:40:39 CET 2017

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