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ZNF511 (zinc finger protein 511)

Identity

Alias (NCBI)Zfp511
HGNC (Hugo) ZNF511
HGNC Alias symbMGC30006
LocusID (NCBI) 118472
Atlas_Id 76196
Location 10q26.3  [Link to chromosome band 10q26]
Location_base_pair Starts at 133308914 and ends at 133313161 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LY6E (8q24.3) / ZNF511 (10q26.3)MTG1 (10q26.3) / ZNF511 (10q26.3)ZNF511 (10q26.3) / EZR (6q25.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF511   28445
Cards
Entrez_Gene (NCBI)ZNF511    zinc finger protein 511
AliasesZfp511
GeneCards (Weizmann)ZNF511
Ensembl hg19 (Hinxton)ENSG00000198546 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198546 [Gene_View]  ENSG00000198546 [Sequence]  chr10:133308914-133313161 [Contig_View]  ZNF511 [Vega]
ICGC DataPortalENSG00000198546
TCGA cBioPortalZNF511
AceView (NCBI)ZNF511
Genatlas (Paris)ZNF511
SOURCE (Princeton)ZNF511
Genetics Home Reference (NIH)ZNF511
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF511  -     chr10:133308914-133313161 +  10q26.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF511  -     10q26.3   [Description]    (hg19-Feb_2009)
GoldenPathZNF511 - 10q26.3 [CytoView hg19]  ZNF511 - 10q26.3 [CytoView hg38]
ImmunoBaseENSG00000198546
Genome Data Viewer NCBIZNF511 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK091711 AK292380 AL530248 BC015139 BC019897
RefSeq transcript (Entrez)NM_145806
Consensus coding sequences : CCDS (NCBI)ZNF511
Gene ExpressionZNF511 [ NCBI-GEO ]   ZNF511 [ EBI - ARRAY_EXPRESS ]   ZNF511 [ SEEK ]   ZNF511 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF511 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF511 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)118472
GTEX Portal (Tissue expression)ZNF511
Human Protein AtlasENSG00000198546-ZNF511 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NB15   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NB15  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NB15
PhosPhoSitePlusQ8NB15
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)   
Domains : Interpro (EBI)ZNF511    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF511
SuperfamilyQ8NB15
AlphaFold pdb e-kbQ8NB15   
Human Protein Atlas [tissue]ENSG00000198546-ZNF511 [tissue]
HPRD15812
Protein Interaction databases
DIP (DOE-UCLA)Q8NB15
IntAct (EBI)Q8NB15
BioGRIDZNF511
STRING (EMBL)ZNF511
ZODIACZNF511
Ontologies - Pathways
QuickGOQ8NB15
Ontology : AmiGOchromatin  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  protein binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIchromatin  DNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  protein binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF511
Atlas of Cancer Signalling NetworkZNF511
Wikipedia pathwaysZNF511
Orthology - Evolution
OrthoDB118472
GeneTree (enSembl)ENSG00000198546
Phylogenetic Trees/Animal Genes : TreeFamZNF511
Homologs : HomoloGeneZNF511
Homology/Alignments : Family Browser (UCSC)ZNF511
Gene fusions - Rearrangements
Fusion : QuiverZNF511
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF511 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF511
dbVarZNF511
ClinVarZNF511
MonarchZNF511
1000_GenomesZNF511 
Exome Variant ServerZNF511
GNOMAD BrowserENSG00000198546
Varsome BrowserZNF511
ACMGZNF511 variants
VarityQ8NB15
Genomic Variants (DGV)ZNF511 [DGVbeta]
DECIPHERZNF511 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF511 
Mutations
ICGC Data PortalZNF511 
TCGA Data PortalZNF511 
Broad Tumor PortalZNF511
OASIS PortalZNF511 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF511  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF511
Mutations and Diseases : HGMDZNF511
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF511
DgiDB (Drug Gene Interaction Database)ZNF511
DoCM (Curated mutations)ZNF511
CIViC (Clinical Interpretations of Variants in Cancer)ZNF511
Cancer3DZNF511
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF511
MedgenZNF511
Genetic Testing Registry ZNF511
NextProtQ8NB15 [Medical]
GENETestsZNF511
Target ValidationZNF511
Huge Navigator ZNF511 [HugePedia]
ClinGenZNF511
Clinical trials, drugs, therapy
MyCancerGenomeZNF511
Protein Interactions : CTDZNF511
Pharm GKB GenePA134940031
PharosQ8NB15
Clinical trialZNF511
Miscellaneous
canSAR (ICR)ZNF511
HarmonizomeZNF511
DataMed IndexZNF511
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF511
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 16:29:50 CEST 2021

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