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ZNF514 (zinc finger protein 514)

Identity

Alias_symbol (synonym)FLJ14457
Other alias-
HGNC (Hugo) ZNF514
LocusID (NCBI) 84874
Atlas_Id 76201
Location 2q11.1  [Link to chromosome band 2q11]
Location_base_pair Starts at 95813400 and ends at 95825263 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ZNF514 (2q11.1) / ZNF514 (2q11.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF514   25894
Cards
Entrez_Gene (NCBI)ZNF514  84874  zinc finger protein 514
Aliases
GeneCards (Weizmann)ZNF514
Ensembl hg19 (Hinxton)ENSG00000144026 [Gene_View]  chr2:95813400-95825263 [Contig_View]  ZNF514 [Vega]
Ensembl hg38 (Hinxton)ENSG00000144026 [Gene_View]  chr2:95813400-95825263 [Contig_View]  ZNF514 [Vega]
ICGC DataPortalENSG00000144026
TCGA cBioPortalZNF514
AceView (NCBI)ZNF514
Genatlas (Paris)ZNF514
WikiGenes84874
SOURCE (Princeton)ZNF514
Genetics Home Reference (NIH)ZNF514
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF514  -     chr2:95813400-95825263 -  2q11.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF514  -     2q11.1   [Description]    (hg38-Dec_2013)
EnsemblZNF514 - 2q11.1 [CytoView hg19]  ZNF514 - 2q11.1 [CytoView hg38]
Mapping of homologs : NCBIZNF514 [Mapview hg19]  ZNF514 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK027363 AL832263 AL833754 BC068498 BC074900
RefSeq transcript (Entrez)NM_032788
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929303
Consensus coding sequences : CCDS (NCBI)ZNF514
Cluster EST : UnigeneHs.655109 [ NCBI ]
CGAP (NCI)Hs.655109
Alternative Splicing GalleryENSG00000144026
Gene ExpressionZNF514 [ NCBI-GEO ]   ZNF514 [ EBI - ARRAY_EXPRESS ]   ZNF514 [ SEEK ]   ZNF514 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF514 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84874
GTEX Portal (Tissue expression)ZNF514
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96K75   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96K75  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96K75
Splice isoforms : SwissVarQ96K75
PhosPhoSitePlusQ96K75
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF514
DMDM Disease mutations84874
Blocks (Seattle)ZNF514
SuperfamilyQ96K75
Human Protein AtlasENSG00000144026
Peptide AtlasQ96K75
HPRD15814
IPIIPI01014924   IPI00064458   IPI00926609   
Protein Interaction databases
DIP (DOE-UCLA)Q96K75
IntAct (EBI)Q96K75
FunCoupENSG00000144026
BioGRIDZNF514
STRING (EMBL)ZNF514
ZODIACZNF514
Ontologies - Pathways
QuickGOQ96K75
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF514
Atlas of Cancer Signalling NetworkZNF514
Wikipedia pathwaysZNF514
Orthology - Evolution
OrthoDB84874
GeneTree (enSembl)ENSG00000144026
Phylogenetic Trees/Animal Genes : TreeFamZNF514
HOVERGENQ96K75
HOGENOMQ96K75
Homologs : HomoloGeneZNF514
Homology/Alignments : Family Browser (UCSC)ZNF514
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF514 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF514
dbVarZNF514
ClinVarZNF514
1000_GenomesZNF514 
Exome Variant ServerZNF514
ExAC (Exome Aggregation Consortium)ZNF514 (select the gene name)
Genetic variants : HAPMAP84874
Genomic Variants (DGV)ZNF514 [DGVbeta]
DECIPHER (Syndromes)2:95813400-95825263  ENSG00000144026
CONAN: Copy Number AnalysisZNF514 
Mutations
ICGC Data PortalZNF514 
TCGA Data PortalZNF514 
Broad Tumor PortalZNF514
OASIS PortalZNF514 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF514  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF514
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF514
DgiDB (Drug Gene Interaction Database)ZNF514
DoCM (Curated mutations)ZNF514 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF514 (select a term)
intoGenZNF514
Cancer3DZNF514(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF514
Genetic Testing Registry ZNF514
NextProtQ96K75 [Medical]
TSGene84874
GENETestsZNF514
Huge Navigator ZNF514 [HugePedia]
snp3D : Map Gene to Disease84874
BioCentury BCIQZNF514
ClinGenZNF514
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84874
Chemical/Pharm GKB GenePA134978837
Clinical trialZNF514
Miscellaneous
canSAR (ICR)ZNF514 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF514
EVEXZNF514
GoPubMedZNF514
iHOPZNF514
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:12 CET 2017

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