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ZNF525 (zinc finger protein 525)

Identity

Alias_symbol (synonym)KIAA1979
Other alias-
HGNC (Hugo) ZNF525
LocusID (NCBI) 170958
Atlas_Id 76208
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53868968 and ends at 53889841 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF525   29423
Cards
Entrez_Gene (NCBI)ZNF525  170958  zinc finger protein 525
Aliases
GeneCards (Weizmann)ZNF525
Ensembl hg19 (Hinxton)ENSG00000203326 [Gene_View]  chr19:53868968-53889841 [Contig_View]  ZNF525 [Vega]
Ensembl hg38 (Hinxton)ENSG00000203326 [Gene_View]  chr19:53868968-53889841 [Contig_View]  ZNF525 [Vega]
ICGC DataPortalENSG00000203326
TCGA cBioPortalZNF525
AceView (NCBI)ZNF525
Genatlas (Paris)ZNF525
WikiGenes170958
SOURCE (Princeton)ZNF525
Genetics Home Reference (NIH)ZNF525
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF525  -     chr19:53868968-53889841 +  19q13.42   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF525  -     19q13.42   [Description]    (hg38-Dec_2013)
EnsemblZNF525 - 19q13.42 [CytoView hg19]  ZNF525 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIZNF525 [Mapview hg19]  ZNF525 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB075859 AK097037 AK098804 BQ028675 DB221179
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF525
Cluster EST : UnigeneHs.352638 [ NCBI ]
CGAP (NCI)Hs.352638
Alternative Splicing GalleryENSG00000203326
Gene ExpressionZNF525 [ NCBI-GEO ]   ZNF525 [ EBI - ARRAY_EXPRESS ]   ZNF525 [ SEEK ]   ZNF525 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF525 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)170958
GTEX Portal (Tissue expression)ZNF525
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N782   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N782  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N782
Splice isoforms : SwissVarQ8N782
PhosPhoSitePlusQ8N782
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF525
DMDM Disease mutations170958
Blocks (Seattle)ZNF525
SuperfamilyQ8N782
Human Protein AtlasENSG00000203326
Peptide AtlasQ8N782
IPIIPI00431696   IPI01010282   IPI00947104   IPI00979961   IPI00945087   
Protein Interaction databases
DIP (DOE-UCLA)Q8N782
IntAct (EBI)Q8N782
FunCoupENSG00000203326
BioGRIDZNF525
STRING (EMBL)ZNF525
ZODIACZNF525
Ontologies - Pathways
QuickGOQ8N782
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF525
Atlas of Cancer Signalling NetworkZNF525
Wikipedia pathwaysZNF525
Orthology - Evolution
OrthoDB170958
GeneTree (enSembl)ENSG00000203326
Phylogenetic Trees/Animal Genes : TreeFamZNF525
HOVERGENQ8N782
HOGENOMQ8N782
Homologs : HomoloGeneZNF525
Homology/Alignments : Family Browser (UCSC)ZNF525
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF525 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF525
dbVarZNF525
ClinVarZNF525
1000_GenomesZNF525 
Exome Variant ServerZNF525
ExAC (Exome Aggregation Consortium)ZNF525 (select the gene name)
Genetic variants : HAPMAP170958
Genomic Variants (DGV)ZNF525 [DGVbeta]
DECIPHER (Syndromes)19:53868968-53889841  ENSG00000203326
CONAN: Copy Number AnalysisZNF525 
Mutations
ICGC Data PortalZNF525 
TCGA Data PortalZNF525 
Broad Tumor PortalZNF525
OASIS PortalZNF525 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF525  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF525
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF525
DgiDB (Drug Gene Interaction Database)ZNF525
DoCM (Curated mutations)ZNF525 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF525 (select a term)
intoGenZNF525
Cancer3DZNF525(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF525
Genetic Testing Registry ZNF525
NextProtQ8N782 [Medical]
TSGene170958
GENETestsZNF525
Huge Navigator ZNF525 [HugePedia]
snp3D : Map Gene to Disease170958
BioCentury BCIQZNF525
ClinGenZNF525
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD170958
Chemical/Pharm GKB GenePA134989094
Clinical trialZNF525
Miscellaneous
canSAR (ICR)ZNF525 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF525
EVEXZNF525
GoPubMedZNF525
iHOPZNF525
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:13 CET 2017

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