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ZNF526 (zinc finger protein 526)

Identity

Alias_symbol (synonym)KIAA1951
MGC4267
Other alias-
HGNC (Hugo) ZNF526
LocusID (NCBI) 116115
Atlas_Id 76209
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 42724492 and ends at 42732353 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
GDI2 (10p15.1) / ZNF526 (19q13.2)ZNF526 (19q13.2) / DEDD2 (19q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF526   29415
Cards
Entrez_Gene (NCBI)ZNF526  116115  zinc finger protein 526
Aliases
GeneCards (Weizmann)ZNF526
Ensembl hg19 (Hinxton)ENSG00000167625 [Gene_View]  chr19:42724492-42732353 [Contig_View]  ZNF526 [Vega]
Ensembl hg38 (Hinxton)ENSG00000167625 [Gene_View]  chr19:42724492-42732353 [Contig_View]  ZNF526 [Vega]
ICGC DataPortalENSG00000167625
TCGA cBioPortalZNF526
AceView (NCBI)ZNF526
Genatlas (Paris)ZNF526
WikiGenes116115
SOURCE (Princeton)ZNF526
Genetics Home Reference (NIH)ZNF526
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF526  -     chr19:42724492-42732353 +  19q13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF526  -     19q13.2   [Description]    (hg38-Dec_2013)
EnsemblZNF526 - 19q13.2 [CytoView hg19]  ZNF526 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF526 [Mapview hg19]  ZNF526 [Mapview hg38]
OMIM614387   
Gene and transcription
Genbank (Entrez)AB075831 AK055681 AK122649 AK298895 AL833399
RefSeq transcript (Entrez)NM_133444
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF526
Cluster EST : UnigeneHs.137282 [ NCBI ]
CGAP (NCI)Hs.137282
Alternative Splicing GalleryENSG00000167625
Gene ExpressionZNF526 [ NCBI-GEO ]   ZNF526 [ EBI - ARRAY_EXPRESS ]   ZNF526 [ SEEK ]   ZNF526 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF526 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)116115
GTEX Portal (Tissue expression)ZNF526
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TF50   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TF50  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TF50
Splice isoforms : SwissVarQ8TF50
PhosPhoSitePlusQ8TF50
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF526
DMDM Disease mutations116115
Blocks (Seattle)ZNF526
SuperfamilyQ8TF50
Human Protein AtlasENSG00000167625
Peptide AtlasQ8TF50
HPRD15818
IPIIPI00644151   IPI00910351   
Protein Interaction databases
DIP (DOE-UCLA)Q8TF50
IntAct (EBI)Q8TF50
FunCoupENSG00000167625
BioGRIDZNF526
STRING (EMBL)ZNF526
ZODIACZNF526
Ontologies - Pathways
QuickGOQ8TF50
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF526
Atlas of Cancer Signalling NetworkZNF526
Wikipedia pathwaysZNF526
Orthology - Evolution
OrthoDB116115
GeneTree (enSembl)ENSG00000167625
Phylogenetic Trees/Animal Genes : TreeFamZNF526
HOVERGENQ8TF50
HOGENOMQ8TF50
Homologs : HomoloGeneZNF526
Homology/Alignments : Family Browser (UCSC)ZNF526
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF526 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF526
dbVarZNF526
ClinVarZNF526
1000_GenomesZNF526 
Exome Variant ServerZNF526
ExAC (Exome Aggregation Consortium)ZNF526 (select the gene name)
Genetic variants : HAPMAP116115
Genomic Variants (DGV)ZNF526 [DGVbeta]
DECIPHER (Syndromes)19:42724492-42732353  ENSG00000167625
CONAN: Copy Number AnalysisZNF526 
Mutations
ICGC Data PortalZNF526 
TCGA Data PortalZNF526 
Broad Tumor PortalZNF526
OASIS PortalZNF526 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF526  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF526
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF526
DgiDB (Drug Gene Interaction Database)ZNF526
DoCM (Curated mutations)ZNF526 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF526 (select a term)
intoGenZNF526
Cancer3DZNF526(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614387   
Orphanet
MedgenZNF526
Genetic Testing Registry ZNF526
NextProtQ8TF50 [Medical]
TSGene116115
GENETestsZNF526
Huge Navigator ZNF526 [HugePedia]
snp3D : Map Gene to Disease116115
BioCentury BCIQZNF526
ClinGenZNF526
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD116115
Chemical/Pharm GKB GenePA134967668
Clinical trialZNF526
Miscellaneous
canSAR (ICR)ZNF526 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF526
EVEXZNF526
GoPubMedZNF526
iHOPZNF526
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:14 CET 2017

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