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ZNF527 (zinc finger protein 527)

Identity

Alias_symbol (synonym)KIAA1829
Other alias-
HGNC (Hugo) ZNF527
LocusID (NCBI) 84503
Atlas_Id 76210
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 37371157 and ends at 37393064 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF527   29385
Cards
Entrez_Gene (NCBI)ZNF527  84503  zinc finger protein 527
Aliases
GeneCards (Weizmann)ZNF527
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:37371157-37393064 [Contig_View]  ZNF527 [Vega]
TCGA cBioPortalZNF527
AceView (NCBI)ZNF527
Genatlas (Paris)ZNF527
WikiGenes84503
SOURCE (Princeton)ZNF527
Genetics Home Reference (NIH)ZNF527
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF527  -     chr19:37371157-37393064 +  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF527  -     19q13.12   [Description]    (hg19-Feb_2009)
EnsemblZNF527 - 19q13.12 [CytoView hg19]  ZNF527 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIZNF527 [Mapview hg19]  ZNF527 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB058732 AK091585 AK301135 BC014325 DC341389
RefSeq transcript (Entrez)NM_032453
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF527
Cluster EST : UnigeneHs.590940 [ NCBI ]
CGAP (NCI)Hs.590940
Gene ExpressionZNF527 [ NCBI-GEO ]   ZNF527 [ EBI - ARRAY_EXPRESS ]   ZNF527 [ SEEK ]   ZNF527 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF527 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84503
GTEX Portal (Tissue expression)ZNF527
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NB42   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NB42  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NB42
Splice isoforms : SwissVarQ8NB42
PhosPhoSitePlusQ8NB42
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF527
DMDM Disease mutations84503
Blocks (Seattle)ZNF527
SuperfamilyQ8NB42
Peptide AtlasQ8NB42
IPIIPI00847885   IPI00184061   IPI00645762   
Protein Interaction databases
DIP (DOE-UCLA)Q8NB42
IntAct (EBI)Q8NB42
BioGRIDZNF527
STRING (EMBL)ZNF527
ZODIACZNF527
Ontologies - Pathways
QuickGOQ8NB42
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF527
Atlas of Cancer Signalling NetworkZNF527
Wikipedia pathwaysZNF527
Orthology - Evolution
OrthoDB84503
Phylogenetic Trees/Animal Genes : TreeFamZNF527
HOVERGENQ8NB42
HOGENOMQ8NB42
Homologs : HomoloGeneZNF527
Homology/Alignments : Family Browser (UCSC)ZNF527
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF527 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF527
dbVarZNF527
ClinVarZNF527
1000_GenomesZNF527 
Exome Variant ServerZNF527
ExAC (Exome Aggregation Consortium)ZNF527 (select the gene name)
Genetic variants : HAPMAP84503
Genomic Variants (DGV)ZNF527 [DGVbeta]
DECIPHERZNF527 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF527 
Mutations
ICGC Data PortalZNF527 
TCGA Data PortalZNF527 
Broad Tumor PortalZNF527
OASIS PortalZNF527 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF527  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF527
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF527
DgiDB (Drug Gene Interaction Database)ZNF527
DoCM (Curated mutations)ZNF527 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF527 (select a term)
intoGenZNF527
Cancer3DZNF527(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF527
Genetic Testing Registry ZNF527
NextProtQ8NB42 [Medical]
TSGene84503
GENETestsZNF527
Target ValidationZNF527
Huge Navigator ZNF527 [HugePedia]
snp3D : Map Gene to Disease84503
BioCentury BCIQZNF527
ClinGenZNF527
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84503
Chemical/Pharm GKB GenePA134973274
Clinical trialZNF527
Miscellaneous
canSAR (ICR)ZNF527 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF527
EVEXZNF527
GoPubMedZNF527
iHOPZNF527
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:50:38 CEST 2017

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