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ZNF528 (zinc finger protein 528)

Identity

Alias_symbol (synonym)KIAA1827
Other alias-
HGNC (Hugo) ZNF528
LocusID (NCBI) 84436
Atlas_Id 76211
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 52901121 and ends at 52921657 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF528   29384
Cards
Entrez_Gene (NCBI)ZNF528  84436  zinc finger protein 528
Aliases
GeneCards (Weizmann)ZNF528
Ensembl hg19 (Hinxton)ENSG00000167555 [Gene_View]  chr19:52901121-52921657 [Contig_View]  ZNF528 [Vega]
Ensembl hg38 (Hinxton)ENSG00000167555 [Gene_View]  chr19:52901121-52921657 [Contig_View]  ZNF528 [Vega]
ICGC DataPortalENSG00000167555
TCGA cBioPortalZNF528
AceView (NCBI)ZNF528
Genatlas (Paris)ZNF528
WikiGenes84436
SOURCE (Princeton)ZNF528
Genetics Home Reference (NIH)ZNF528
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF528  -     chr19:52901121-52921657 +  19q13.41   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF528  -     19q13.41   [Description]    (hg38-Dec_2013)
EnsemblZNF528 - 19q13.41 [CytoView hg19]  ZNF528 - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBIZNF528 [Mapview hg19]  ZNF528 [Mapview hg38]
OMIM615580   
Gene and transcription
Genbank (Entrez)AB058730 AK023429 AK056552 AL832630 AL833325
RefSeq transcript (Entrez)NM_032423
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF528
Cluster EST : UnigeneHs.662043 [ NCBI ]
CGAP (NCI)Hs.662043
Alternative Splicing GalleryENSG00000167555
Gene ExpressionZNF528 [ NCBI-GEO ]   ZNF528 [ EBI - ARRAY_EXPRESS ]   ZNF528 [ SEEK ]   ZNF528 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF528 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84436
GTEX Portal (Tissue expression)ZNF528
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3MIS6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3MIS6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3MIS6
Splice isoforms : SwissVarQ3MIS6
PhosPhoSitePlusQ3MIS6
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF528
DMDM Disease mutations84436
Blocks (Seattle)ZNF528
SuperfamilyQ3MIS6
Human Protein AtlasENSG00000167555
Peptide AtlasQ3MIS6
HPRD15820
IPIIPI00477799   IPI00829967   IPI00973974   IPI00927240   IPI00927041   IPI00974041   IPI00982267   IPI00982994   
Protein Interaction databases
DIP (DOE-UCLA)Q3MIS6
IntAct (EBI)Q3MIS6
FunCoupENSG00000167555
BioGRIDZNF528
STRING (EMBL)ZNF528
ZODIACZNF528
Ontologies - Pathways
QuickGOQ3MIS6
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF528
Atlas of Cancer Signalling NetworkZNF528
Wikipedia pathwaysZNF528
Orthology - Evolution
OrthoDB84436
GeneTree (enSembl)ENSG00000167555
Phylogenetic Trees/Animal Genes : TreeFamZNF528
HOVERGENQ3MIS6
HOGENOMQ3MIS6
Homologs : HomoloGeneZNF528
Homology/Alignments : Family Browser (UCSC)ZNF528
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF528 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF528
dbVarZNF528
ClinVarZNF528
1000_GenomesZNF528 
Exome Variant ServerZNF528
ExAC (Exome Aggregation Consortium)ZNF528 (select the gene name)
Genetic variants : HAPMAP84436
Genomic Variants (DGV)ZNF528 [DGVbeta]
DECIPHER (Syndromes)19:52901121-52921657  ENSG00000167555
CONAN: Copy Number AnalysisZNF528 
Mutations
ICGC Data PortalZNF528 
TCGA Data PortalZNF528 
Broad Tumor PortalZNF528
OASIS PortalZNF528 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF528  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF528
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF528
DgiDB (Drug Gene Interaction Database)ZNF528
DoCM (Curated mutations)ZNF528 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF528 (select a term)
intoGenZNF528
Cancer3DZNF528(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615580   
Orphanet
MedgenZNF528
Genetic Testing Registry ZNF528
NextProtQ3MIS6 [Medical]
TSGene84436
GENETestsZNF528
Huge Navigator ZNF528 [HugePedia]
snp3D : Map Gene to Disease84436
BioCentury BCIQZNF528
ClinGenZNF528
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84436
Chemical/Pharm GKB GenePA134869369
Clinical trialZNF528
Miscellaneous
canSAR (ICR)ZNF528 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF528
EVEXZNF528
GoPubMedZNF528
iHOPZNF528
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:53:14 CET 2017

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