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ZNF529 (zinc finger protein 529)

Identity

Alias_symbol (synonym)KIAA1615
Other alias-
HGNC (Hugo) ZNF529
LocusID (NCBI) 57711
Atlas_Id 76213
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 36543615 and ends at 36605276 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF529 (19q13.12) / NEAT1 (11q13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF529   29328
Cards
Entrez_Gene (NCBI)ZNF529  57711  zinc finger protein 529
Aliases
GeneCards (Weizmann)ZNF529
Ensembl hg19 (Hinxton)ENSG00000186020 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186020 [Gene_View]  chr19:36543615-36605276 [Contig_View]  ZNF529 [Vega]
ICGC DataPortalENSG00000186020
TCGA cBioPortalZNF529
AceView (NCBI)ZNF529
Genatlas (Paris)ZNF529
WikiGenes57711
SOURCE (Princeton)ZNF529
Genetics Home Reference (NIH)ZNF529
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF529  -     chr19:36543615-36605276 -  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF529  -     19q13.12   [Description]    (hg19-Feb_2009)
EnsemblZNF529 - 19q13.12 [CytoView hg19]  ZNF529 - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIZNF529 [Mapview hg19]  ZNF529 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB046835 AK025110 AK091072 AK094618 AL109722
RefSeq transcript (Entrez)NM_001145649 NM_001145650 NM_001321351 NM_020951
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF529
Cluster EST : UnigeneHs.654960 [ NCBI ]
CGAP (NCI)Hs.654960
Alternative Splicing GalleryENSG00000186020
Gene ExpressionZNF529 [ NCBI-GEO ]   ZNF529 [ EBI - ARRAY_EXPRESS ]   ZNF529 [ SEEK ]   ZNF529 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF529 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57711
GTEX Portal (Tissue expression)ZNF529
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P280   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P280  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P280
Splice isoforms : SwissVarQ6P280
PhosPhoSitePlusQ6P280
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF529
DMDM Disease mutations57711
Blocks (Seattle)ZNF529
SuperfamilyQ6P280
Human Protein AtlasENSG00000186020
Peptide AtlasQ6P280
HPRD15821
IPIIPI00288987   IPI00923572   
Protein Interaction databases
DIP (DOE-UCLA)Q6P280
IntAct (EBI)Q6P280
FunCoupENSG00000186020
BioGRIDZNF529
STRING (EMBL)ZNF529
ZODIACZNF529
Ontologies - Pathways
QuickGOQ6P280
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF529
Atlas of Cancer Signalling NetworkZNF529
Wikipedia pathwaysZNF529
Orthology - Evolution
OrthoDB57711
GeneTree (enSembl)ENSG00000186020
Phylogenetic Trees/Animal Genes : TreeFamZNF529
HOVERGENQ6P280
HOGENOMQ6P280
Homologs : HomoloGeneZNF529
Homology/Alignments : Family Browser (UCSC)ZNF529
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF529 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF529
dbVarZNF529
ClinVarZNF529
1000_GenomesZNF529 
Exome Variant ServerZNF529
ExAC (Exome Aggregation Consortium)ZNF529 (select the gene name)
Genetic variants : HAPMAP57711
Genomic Variants (DGV)ZNF529 [DGVbeta]
DECIPHERZNF529 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF529 
Mutations
ICGC Data PortalZNF529 
TCGA Data PortalZNF529 
Broad Tumor PortalZNF529
OASIS PortalZNF529 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF529
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF529
DgiDB (Drug Gene Interaction Database)ZNF529
DoCM (Curated mutations)ZNF529 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF529 (select a term)
intoGenZNF529
Cancer3DZNF529(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF529
Genetic Testing Registry ZNF529
NextProtQ6P280 [Medical]
TSGene57711
GENETestsZNF529
Target ValidationZNF529
Huge Navigator ZNF529 [HugePedia]
snp3D : Map Gene to Disease57711
BioCentury BCIQZNF529
ClinGenZNF529
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57711
Chemical/Pharm GKB GenePA134910867
Clinical trialZNF529
Miscellaneous
canSAR (ICR)ZNF529 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF529
EVEXZNF529
GoPubMedZNF529
iHOPZNF529
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:39 CEST 2017

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