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ZNF532 (zinc finger protein 532)

Identity

Alias_symbol (synonym)FLJ10697
Other alias-
HGNC (Hugo) ZNF532
LocusID (NCBI) 55205
Atlas_Id 76216
Location 18q21.32  [Link to chromosome band 18q21]
Location_base_pair Starts at 56530061 and ends at 56653709 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
C9orf91 (9q32) / ZNF532 (18q21.32)ZNF532 (18q21.32) / ZNF532 (18q21.32)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF532   30940
Cards
Entrez_Gene (NCBI)ZNF532  55205  zinc finger protein 532
Aliases
GeneCards (Weizmann)ZNF532
Ensembl hg19 (Hinxton)ENSG00000074657 [Gene_View]  chr18:56530061-56653709 [Contig_View]  ZNF532 [Vega]
Ensembl hg38 (Hinxton)ENSG00000074657 [Gene_View]  chr18:56530061-56653709 [Contig_View]  ZNF532 [Vega]
ICGC DataPortalENSG00000074657
TCGA cBioPortalZNF532
AceView (NCBI)ZNF532
Genatlas (Paris)ZNF532
WikiGenes55205
SOURCE (Princeton)ZNF532
Genetics Home Reference (NIH)ZNF532
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF532  -     chr18:56530061-56653709 +  18q21.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF532  -     18q21.32   [Description]    (hg38-Dec_2013)
EnsemblZNF532 - 18q21.32 [CytoView hg19]  ZNF532 - 18q21.32 [CytoView hg38]
Mapping of homologs : NCBIZNF532 [Mapview hg19]  ZNF532 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA953833 AB046849 AF295077 AK001559 AK122835
RefSeq transcript (Entrez)NM_018181
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010966 NW_004929411
Consensus coding sequences : CCDS (NCBI)ZNF532
Cluster EST : UnigeneHs.607676 [ NCBI ]
CGAP (NCI)Hs.607676
Alternative Splicing GalleryENSG00000074657
Gene ExpressionZNF532 [ NCBI-GEO ]   ZNF532 [ EBI - ARRAY_EXPRESS ]   ZNF532 [ SEEK ]   ZNF532 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF532 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55205
GTEX Portal (Tissue expression)ZNF532
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HCE3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HCE3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HCE3
Splice isoforms : SwissVarQ9HCE3
PhosPhoSitePlusQ9HCE3
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF532
DMDM Disease mutations55205
Blocks (Seattle)ZNF532
SuperfamilyQ9HCE3
Human Protein AtlasENSG00000074657
Peptide AtlasQ9HCE3
HPRD11724
IPIIPI00151988   
Protein Interaction databases
DIP (DOE-UCLA)Q9HCE3
IntAct (EBI)Q9HCE3
FunCoupENSG00000074657
BioGRIDZNF532
STRING (EMBL)ZNF532
ZODIACZNF532
Ontologies - Pathways
QuickGOQ9HCE3
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF532
Atlas of Cancer Signalling NetworkZNF532
Wikipedia pathwaysZNF532
Orthology - Evolution
OrthoDB55205
GeneTree (enSembl)ENSG00000074657
Phylogenetic Trees/Animal Genes : TreeFamZNF532
HOVERGENQ9HCE3
HOGENOMQ9HCE3
Homologs : HomoloGeneZNF532
Homology/Alignments : Family Browser (UCSC)ZNF532
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF532 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF532
dbVarZNF532
ClinVarZNF532
1000_GenomesZNF532 
Exome Variant ServerZNF532
ExAC (Exome Aggregation Consortium)ZNF532 (select the gene name)
Genetic variants : HAPMAP55205
Genomic Variants (DGV)ZNF532 [DGVbeta]
DECIPHER (Syndromes)18:56530061-56653709  ENSG00000074657
CONAN: Copy Number AnalysisZNF532 
Mutations
ICGC Data PortalZNF532 
TCGA Data PortalZNF532 
Broad Tumor PortalZNF532
OASIS PortalZNF532 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF532  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF532
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF532
DgiDB (Drug Gene Interaction Database)ZNF532
DoCM (Curated mutations)ZNF532 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF532 (select a term)
intoGenZNF532
Cancer3DZNF532(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF532
Genetic Testing Registry ZNF532
NextProtQ9HCE3 [Medical]
TSGene55205
GENETestsZNF532
Huge Navigator ZNF532 [HugePedia]
snp3D : Map Gene to Disease55205
BioCentury BCIQZNF532
ClinGenZNF532
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55205
Chemical/Pharm GKB GenePA134901858
Clinical trialZNF532
Miscellaneous
canSAR (ICR)ZNF532 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF532
EVEXZNF532
GoPubMedZNF532
iHOPZNF532
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:15 CET 2017

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