Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZNF561-AS1 (ZNF561 antisense RNA 1 (head to head))

Identity

Alias_namesC19orf82
chromosome 19 open reading frame 82
Other alias
HGNC (Hugo) ZNF561-AS1
LocusID (NCBI) 284385
Atlas_Id 76239
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 9732193 and ends at 9745538 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF561-AS1   27613
Cards
Entrez_Gene (NCBI)ZNF561-AS1  284385  ZNF561 antisense RNA 1 (head to head)
AliasesC19orf82
GeneCards (Weizmann)ZNF561-AS1
Ensembl hg19 (Hinxton)ENSG00000267106 [Gene_View]  chr19:9732193-9745538 [Contig_View]  ZNF561-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000267106 [Gene_View]  chr19:9732193-9745538 [Contig_View]  ZNF561-AS1 [Vega]
ICGC DataPortalENSG00000267106
TCGA cBioPortalZNF561-AS1
AceView (NCBI)ZNF561-AS1
Genatlas (Paris)ZNF561-AS1
WikiGenes284385
SOURCE (Princeton)ZNF561-AS1
Genetics Home Reference (NIH)ZNF561-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF561-AS1  -     chr19:9732193-9745538 +  19p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF561-AS1  -     19p13.2   [Description]    (hg38-Dec_2013)
EnsemblZNF561-AS1 - 19p13.2 [CytoView hg19]  ZNF561-AS1 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF561-AS1 [Mapview hg19]  ZNF561-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097685 AL525141 BC143540 DB487189
RefSeq transcript (Entrez)NM_001242812
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)ZNF561-AS1
Cluster EST : UnigeneHs.733676 [ NCBI ]
CGAP (NCI)Hs.733676
Alternative Splicing GalleryENSG00000267106
Gene ExpressionZNF561-AS1 [ NCBI-GEO ]   ZNF561-AS1 [ EBI - ARRAY_EXPRESS ]   ZNF561-AS1 [ SEEK ]   ZNF561-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF561-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)284385
GTEX Portal (Tissue expression)ZNF561-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZNF561-AS1
DMDM Disease mutations284385
Blocks (Seattle)ZNF561-AS1
Human Protein AtlasENSG00000267106
Protein Interaction databases
FunCoupENSG00000267106
BioGRIDZNF561-AS1
STRING (EMBL)ZNF561-AS1
ZODIACZNF561-AS1
Ontologies - Pathways
Huge Navigator ZNF561-AS1 [HugePedia]
snp3D : Map Gene to Disease284385
BioCentury BCIQZNF561-AS1
ClinGenZNF561-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284385
Clinical trialZNF561-AS1
Miscellaneous
canSAR (ICR)ZNF561-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF561-AS1
EVEXZNF561-AS1
GoPubMedZNF561-AS1
iHOPZNF561-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:20 CET 2017

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