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ZNF584 (zinc finger protein 584)

Identity

Alias_symbol (synonym)FLJ39899
Other alias-
HGNC (Hugo) ZNF584
LocusID (NCBI) 201514
Atlas_Id 76262
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 58920063 and ends at 58929692 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
ZNF132 (19q13.43) / ZNF584 (19q13.43)ZNF584 (19q13.43) / IGLON5 (19q13.41)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF584   27318
Cards
Entrez_Gene (NCBI)ZNF584  201514  zinc finger protein 584
Aliases
GeneCards (Weizmann)ZNF584
Ensembl hg19 (Hinxton)ENSG00000171574 [Gene_View]  chr19:58920063-58929692 [Contig_View]  ZNF584 [Vega]
Ensembl hg38 (Hinxton)ENSG00000171574 [Gene_View]  chr19:58920063-58929692 [Contig_View]  ZNF584 [Vega]
ICGC DataPortalENSG00000171574
TCGA cBioPortalZNF584
AceView (NCBI)ZNF584
Genatlas (Paris)ZNF584
WikiGenes201514
SOURCE (Princeton)ZNF584
Genetics Home Reference (NIH)ZNF584
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF584  -     chr19:58920063-58929692 +  19q13.43   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF584  -     19q13.43   [Description]    (hg38-Dec_2013)
EnsemblZNF584 - 19q13.43 [CytoView hg19]  ZNF584 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIZNF584 [Mapview hg19]  ZNF584 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097218 AK290068 AK298929 BC017651 BC033149
RefSeq transcript (Entrez)NM_173548
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)ZNF584
Cluster EST : UnigeneHs.439551 [ NCBI ]
CGAP (NCI)Hs.439551
Alternative Splicing GalleryENSG00000171574
Gene ExpressionZNF584 [ NCBI-GEO ]   ZNF584 [ EBI - ARRAY_EXPRESS ]   ZNF584 [ SEEK ]   ZNF584 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF584 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)201514
GTEX Portal (Tissue expression)ZNF584
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IVC4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IVC4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IVC4
Splice isoforms : SwissVarQ8IVC4
PhosPhoSitePlusQ8IVC4
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Krueppel-associated_box    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF584
DMDM Disease mutations201514
Blocks (Seattle)ZNF584
SuperfamilyQ8IVC4
Human Protein AtlasENSG00000171574
Peptide AtlasQ8IVC4
HPRD15861
IPIIPI00216978   IPI00908447   IPI00477396   
Protein Interaction databases
DIP (DOE-UCLA)Q8IVC4
IntAct (EBI)Q8IVC4
FunCoupENSG00000171574
BioGRIDZNF584
STRING (EMBL)ZNF584
ZODIACZNF584
Ontologies - Pathways
QuickGOQ8IVC4
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF584
Atlas of Cancer Signalling NetworkZNF584
Wikipedia pathwaysZNF584
Orthology - Evolution
OrthoDB201514
GeneTree (enSembl)ENSG00000171574
Phylogenetic Trees/Animal Genes : TreeFamZNF584
HOVERGENQ8IVC4
HOGENOMQ8IVC4
Homologs : HomoloGeneZNF584
Homology/Alignments : Family Browser (UCSC)ZNF584
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF584 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF584
dbVarZNF584
ClinVarZNF584
1000_GenomesZNF584 
Exome Variant ServerZNF584
ExAC (Exome Aggregation Consortium)ZNF584 (select the gene name)
Genetic variants : HAPMAP201514
Genomic Variants (DGV)ZNF584 [DGVbeta]
DECIPHER (Syndromes)19:58920063-58929692  ENSG00000171574
CONAN: Copy Number AnalysisZNF584 
Mutations
ICGC Data PortalZNF584 
TCGA Data PortalZNF584 
Broad Tumor PortalZNF584
OASIS PortalZNF584 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF584  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF584
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF584
DgiDB (Drug Gene Interaction Database)ZNF584
DoCM (Curated mutations)ZNF584 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF584 (select a term)
intoGenZNF584
Cancer3DZNF584(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF584
Genetic Testing Registry ZNF584
NextProtQ8IVC4 [Medical]
TSGene201514
GENETestsZNF584
Huge Navigator ZNF584 [HugePedia]
snp3D : Map Gene to Disease201514
BioCentury BCIQZNF584
ClinGenZNF584
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD201514
Chemical/Pharm GKB GenePA134968861
Clinical trialZNF584
Miscellaneous
canSAR (ICR)ZNF584 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF584
EVEXZNF584
GoPubMedZNF584
iHOPZNF584
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:25 CET 2017

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