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ZNF585A (zinc finger protein 585A)

Identity

Alias_symbol (synonym)FLJ23765
Other alias-
HGNC (Hugo) ZNF585A
LocusID (NCBI) 199704
Atlas_Id 76263
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 37147438 and ends at 37172741 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MPND (19p13.3) / ZNF585A (19q13.12)ZNF585A (19q13.12) / GRAMD1A (19q13.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF585A   26305
Cards
Entrez_Gene (NCBI)ZNF585A  199704  zinc finger protein 585A
Aliases
GeneCards (Weizmann)ZNF585A
Ensembl hg19 (Hinxton)ENSG00000196967 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196967 [Gene_View]  chr19:37147438-37172741 [Contig_View]  ZNF585A [Vega]
ICGC DataPortalENSG00000196967
TCGA cBioPortalZNF585A
AceView (NCBI)ZNF585A
Genatlas (Paris)ZNF585A
WikiGenes199704
SOURCE (Princeton)ZNF585A
Genetics Home Reference (NIH)ZNF585A
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF585A  -     chr19:37147438-37172741 -  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF585A  -     19q13.12   [Description]    (hg19-Feb_2009)
EnsemblZNF585A - 19q13.12 [CytoView hg19]  ZNF585A - 19q13.12 [CytoView hg38]
Mapping of homologs : NCBIZNF585A [Mapview hg19]  ZNF585A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086428 AK056389 AK074345 AK123296 AK290660
RefSeq transcript (Entrez)NM_001288800 NM_152655 NM_199126
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF585A
Cluster EST : UnigeneHs.729172 [ NCBI ]
CGAP (NCI)Hs.729172
Alternative Splicing GalleryENSG00000196967
Gene ExpressionZNF585A [ NCBI-GEO ]   ZNF585A [ EBI - ARRAY_EXPRESS ]   ZNF585A [ SEEK ]   ZNF585A [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF585A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)199704
GTEX Portal (Tissue expression)ZNF585A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6P3V2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6P3V2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6P3V2
Splice isoforms : SwissVarQ6P3V2
PhosPhoSitePlusQ6P3V2
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF585A
DMDM Disease mutations199704
Blocks (Seattle)ZNF585A
SuperfamilyQ6P3V2
Human Protein AtlasENSG00000196967
Peptide AtlasQ6P3V2
HPRD15862
IPIIPI00152677   IPI00182689   IPI00646630   IPI00930749   
Protein Interaction databases
DIP (DOE-UCLA)Q6P3V2
IntAct (EBI)Q6P3V2
FunCoupENSG00000196967
BioGRIDZNF585A
STRING (EMBL)ZNF585A
ZODIACZNF585A
Ontologies - Pathways
QuickGOQ6P3V2
Ontology : AmiGOnucleic acid binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBInucleic acid binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF585A
Atlas of Cancer Signalling NetworkZNF585A
Wikipedia pathwaysZNF585A
Orthology - Evolution
OrthoDB199704
GeneTree (enSembl)ENSG00000196967
Phylogenetic Trees/Animal Genes : TreeFamZNF585A
HOVERGENQ6P3V2
HOGENOMQ6P3V2
Homologs : HomoloGeneZNF585A
Homology/Alignments : Family Browser (UCSC)ZNF585A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF585A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF585A
dbVarZNF585A
ClinVarZNF585A
1000_GenomesZNF585A 
Exome Variant ServerZNF585A
ExAC (Exome Aggregation Consortium)ZNF585A (select the gene name)
Genetic variants : HAPMAP199704
Genomic Variants (DGV)ZNF585A [DGVbeta]
DECIPHERZNF585A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF585A 
Mutations
ICGC Data PortalZNF585A 
TCGA Data PortalZNF585A 
Broad Tumor PortalZNF585A
OASIS PortalZNF585A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF585A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF585A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF585A
DgiDB (Drug Gene Interaction Database)ZNF585A
DoCM (Curated mutations)ZNF585A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF585A (select a term)
intoGenZNF585A
Cancer3DZNF585A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF585A
Genetic Testing Registry ZNF585A
NextProtQ6P3V2 [Medical]
TSGene199704
GENETestsZNF585A
Huge Navigator ZNF585A [HugePedia]
snp3D : Map Gene to Disease199704
BioCentury BCIQZNF585A
ClinGenZNF585A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD199704
Chemical/Pharm GKB GenePA134905518
Clinical trialZNF585A
Miscellaneous
canSAR (ICR)ZNF585A (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF585A
EVEXZNF585A
GoPubMedZNF585A
iHOPZNF585A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:03:22 CEST 2017

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