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ZNF594 (zinc finger protein 594)

Identity

Alias_symbol (synonym)KIAA1871
Other alias-
HGNC (Hugo) ZNF594
LocusID (NCBI) 84622
Atlas_Id 76269
Location 17p13.2  [Link to chromosome band 17p13]
Location_base_pair Starts at 5179536 and ends at 5191883 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ZNF594 (17p13.2) / SCIMP (17p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF594   29392
Cards
Entrez_Gene (NCBI)ZNF594  84622  zinc finger protein 594
Aliases
GeneCards (Weizmann)ZNF594
Ensembl hg19 (Hinxton)ENSG00000180626 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180626 [Gene_View]  chr17:5179536-5191883 [Contig_View]  ZNF594 [Vega]
ICGC DataPortalENSG00000180626
TCGA cBioPortalZNF594
AceView (NCBI)ZNF594
Genatlas (Paris)ZNF594
WikiGenes84622
SOURCE (Princeton)ZNF594
Genetics Home Reference (NIH)ZNF594
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF594  -     chr17:5179536-5191883 -  17p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF594  -     17p13.2   [Description]    (hg19-Feb_2009)
EnsemblZNF594 - 17p13.2 [CytoView hg19]  ZNF594 - 17p13.2 [CytoView hg38]
Mapping of homologs : NCBIZNF594 [Mapview hg19]  ZNF594 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB058774 AK131271 AL833185 AY500358 BC136604
RefSeq transcript (Entrez)NM_032530
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF594
Cluster EST : UnigeneHs.658402 [ NCBI ]
CGAP (NCI)Hs.658402
Alternative Splicing GalleryENSG00000180626
Gene ExpressionZNF594 [ NCBI-GEO ]   ZNF594 [ EBI - ARRAY_EXPRESS ]   ZNF594 [ SEEK ]   ZNF594 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF594 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84622
GTEX Portal (Tissue expression)ZNF594
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96JF6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96JF6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96JF6
Splice isoforms : SwissVarQ96JF6
PhosPhoSitePlusQ96JF6
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF594
DMDM Disease mutations84622
Blocks (Seattle)ZNF594
SuperfamilyQ96JF6
Human Protein AtlasENSG00000180626
Peptide AtlasQ96JF6
IPIIPI00738657   IPI00873289   IPI00853191   
Protein Interaction databases
DIP (DOE-UCLA)Q96JF6
IntAct (EBI)Q96JF6
FunCoupENSG00000180626
BioGRIDZNF594
STRING (EMBL)ZNF594
ZODIACZNF594
Ontologies - Pathways
QuickGOQ96JF6
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF594
Atlas of Cancer Signalling NetworkZNF594
Wikipedia pathwaysZNF594
Orthology - Evolution
OrthoDB84622
GeneTree (enSembl)ENSG00000180626
Phylogenetic Trees/Animal Genes : TreeFamZNF594
HOVERGENQ96JF6
HOGENOMQ96JF6
Homologs : HomoloGeneZNF594
Homology/Alignments : Family Browser (UCSC)ZNF594
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF594 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF594
dbVarZNF594
ClinVarZNF594
1000_GenomesZNF594 
Exome Variant ServerZNF594
ExAC (Exome Aggregation Consortium)ZNF594 (select the gene name)
Genetic variants : HAPMAP84622
Genomic Variants (DGV)ZNF594 [DGVbeta]
DECIPHERZNF594 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF594 
Mutations
ICGC Data PortalZNF594 
TCGA Data PortalZNF594 
Broad Tumor PortalZNF594
OASIS PortalZNF594 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF594  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF594
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF594
DgiDB (Drug Gene Interaction Database)ZNF594
DoCM (Curated mutations)ZNF594 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF594 (select a term)
intoGenZNF594
Cancer3DZNF594(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF594
Genetic Testing Registry ZNF594
NextProtQ96JF6 [Medical]
TSGene84622
GENETestsZNF594
Target ValidationZNF594
Huge Navigator ZNF594 [HugePedia]
snp3D : Map Gene to Disease84622
BioCentury BCIQZNF594
ClinGenZNF594
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84622
Chemical/Pharm GKB GenePA134985995
Clinical trialZNF594
Miscellaneous
canSAR (ICR)ZNF594 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF594
EVEXZNF594
GoPubMedZNF594
iHOPZNF594
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:51 CEST 2017

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