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ZNF615 (zinc finger protein 615)

Identity

Alias_symbol (synonym)FLJ33710
Other alias-
HGNC (Hugo) ZNF615
LocusID (NCBI) 284370
Atlas_Id 76283
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 51991334 and ends at 52008230 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF615   24740
Cards
Entrez_Gene (NCBI)ZNF615  284370  zinc finger protein 615
Aliases
GeneCards (Weizmann)ZNF615
Ensembl hg19 (Hinxton)ENSG00000197619 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197619 [Gene_View]  chr19:51991334-52008230 [Contig_View]  ZNF615 [Vega]
ICGC DataPortalENSG00000197619
TCGA cBioPortalZNF615
AceView (NCBI)ZNF615
Genatlas (Paris)ZNF615
WikiGenes284370
SOURCE (Princeton)ZNF615
Genetics Home Reference (NIH)ZNF615
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF615  -     chr19:51991334-52008230 -  19q13.41   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF615  -     19q13.41   [Description]    (hg19-Feb_2009)
EnsemblZNF615 - 19q13.41 [CytoView hg19]  ZNF615 - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBIZNF615 [Mapview hg19]  ZNF615 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK091029 AK094071 AK096691 AK128361 AK131494
RefSeq transcript (Entrez)NM_001199324 NM_001321317 NM_001321318 NM_001321319 NM_001321320 NM_001321321 NM_001321322 NM_001321323 NM_198480
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF615
Cluster EST : UnigeneHs.368355 [ NCBI ]
CGAP (NCI)Hs.368355
Alternative Splicing GalleryENSG00000197619
Gene ExpressionZNF615 [ NCBI-GEO ]   ZNF615 [ EBI - ARRAY_EXPRESS ]   ZNF615 [ SEEK ]   ZNF615 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF615 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284370
GTEX Portal (Tissue expression)ZNF615
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8J6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8J6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8J6
Splice isoforms : SwissVarQ8N8J6
PhosPhoSitePlusQ8N8J6
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF615
DMDM Disease mutations284370
Blocks (Seattle)ZNF615
SuperfamilyQ8N8J6
Human Protein AtlasENSG00000197619
Peptide AtlasQ8N8J6
HPRD15875
IPIIPI00644529   IPI00893871   IPI00871340   IPI00970805   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8J6
IntAct (EBI)Q8N8J6
FunCoupENSG00000197619
BioGRIDZNF615
STRING (EMBL)ZNF615
ZODIACZNF615
Ontologies - Pathways
QuickGOQ8N8J6
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF615
Atlas of Cancer Signalling NetworkZNF615
Wikipedia pathwaysZNF615
Orthology - Evolution
OrthoDB284370
GeneTree (enSembl)ENSG00000197619
Phylogenetic Trees/Animal Genes : TreeFamZNF615
HOVERGENQ8N8J6
HOGENOMQ8N8J6
Homologs : HomoloGeneZNF615
Homology/Alignments : Family Browser (UCSC)ZNF615
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF615 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF615
dbVarZNF615
ClinVarZNF615
1000_GenomesZNF615 
Exome Variant ServerZNF615
ExAC (Exome Aggregation Consortium)ZNF615 (select the gene name)
Genetic variants : HAPMAP284370
Genomic Variants (DGV)ZNF615 [DGVbeta]
DECIPHERZNF615 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF615 
Mutations
ICGC Data PortalZNF615 
TCGA Data PortalZNF615 
Broad Tumor PortalZNF615
OASIS PortalZNF615 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF615  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF615
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF615
DgiDB (Drug Gene Interaction Database)ZNF615
DoCM (Curated mutations)ZNF615 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF615 (select a term)
intoGenZNF615
Cancer3DZNF615(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF615
Genetic Testing Registry ZNF615
NextProtQ8N8J6 [Medical]
TSGene284370
GENETestsZNF615
Target ValidationZNF615
Huge Navigator ZNF615 [HugePedia]
snp3D : Map Gene to Disease284370
BioCentury BCIQZNF615
ClinGenZNF615
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284370
Chemical/Pharm GKB GenePA134872929
Clinical trialZNF615
Miscellaneous
canSAR (ICR)ZNF615 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF615
EVEXZNF615
GoPubMedZNF615
iHOPZNF615
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:50:54 CEST 2017

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