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ZNF626 (zinc finger protein 626)

Identity

Other alias-
HGNC (Hugo) ZNF626
LocusID (NCBI) 199777
Atlas_Id 76293
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 20619939 and ends at 20661596 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF626 (19p12) / ADI1 (2p25.3)ZNF626 (19p12) / PHLPP1 (18q21.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF626   30461
Cards
Entrez_Gene (NCBI)ZNF626  199777  zinc finger protein 626
Aliases
GeneCards (Weizmann)ZNF626
Ensembl hg19 (Hinxton)ENSG00000188171 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188171 [Gene_View]  chr19:20619939-20661596 [Contig_View]  ZNF626 [Vega]
ICGC DataPortalENSG00000188171
TCGA cBioPortalZNF626
AceView (NCBI)ZNF626
Genatlas (Paris)ZNF626
WikiGenes199777
SOURCE (Princeton)ZNF626
Genetics Home Reference (NIH)ZNF626
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF626  -     chr19:20619939-20661596 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF626  -     19p12   [Description]    (hg19-Feb_2009)
EnsemblZNF626 - 19p12 [CytoView hg19]  ZNF626 - 19p12 [CytoView hg38]
Mapping of homologs : NCBIZNF626 [Mapview hg19]  ZNF626 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA525169 AK091329 AK096221 BC007116 BC107803
RefSeq transcript (Entrez)NM_001076675 NM_145297
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF626
Cluster EST : UnigeneHs.657001 [ NCBI ]
CGAP (NCI)Hs.657001
Alternative Splicing GalleryENSG00000188171
Gene ExpressionZNF626 [ NCBI-GEO ]   ZNF626 [ EBI - ARRAY_EXPRESS ]   ZNF626 [ SEEK ]   ZNF626 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF626 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)199777
GTEX Portal (Tissue expression)ZNF626
Human Protein AtlasENSG00000188171-ZNF626 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ68DY1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ68DY1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ68DY1
Splice isoforms : SwissVarQ68DY1
PhosPhoSitePlusQ68DY1
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF626
DMDM Disease mutations199777
Blocks (Seattle)ZNF626
SuperfamilyQ68DY1
Human Protein Atlas [tissue]ENSG00000188171-ZNF626 [tissue]
Peptide AtlasQ68DY1
HPRD15881
IPIIPI00647796   IPI00816465   IPI01011176   IPI00044997   
Protein Interaction databases
DIP (DOE-UCLA)Q68DY1
IntAct (EBI)Q68DY1
FunCoupENSG00000188171
BioGRIDZNF626
STRING (EMBL)ZNF626
ZODIACZNF626
Ontologies - Pathways
QuickGOQ68DY1
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF626
Atlas of Cancer Signalling NetworkZNF626
Wikipedia pathwaysZNF626
Orthology - Evolution
OrthoDB199777
GeneTree (enSembl)ENSG00000188171
Phylogenetic Trees/Animal Genes : TreeFamZNF626
HOVERGENQ68DY1
HOGENOMQ68DY1
Homologs : HomoloGeneZNF626
Homology/Alignments : Family Browser (UCSC)ZNF626
Gene fusions - Rearrangements
Fusion: Tumor Portal ZNF626
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF626 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF626
dbVarZNF626
ClinVarZNF626
1000_GenomesZNF626 
Exome Variant ServerZNF626
ExAC (Exome Aggregation Consortium)ENSG00000188171
GNOMAD BrowserENSG00000188171
Genetic variants : HAPMAP199777
Genomic Variants (DGV)ZNF626 [DGVbeta]
DECIPHERZNF626 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF626 
Mutations
ICGC Data PortalZNF626 
TCGA Data PortalZNF626 
Broad Tumor PortalZNF626
OASIS PortalZNF626 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF626  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF626
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF626
DgiDB (Drug Gene Interaction Database)ZNF626
DoCM (Curated mutations)ZNF626 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF626 (select a term)
intoGenZNF626
Cancer3DZNF626(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF626
Genetic Testing Registry ZNF626
NextProtQ68DY1 [Medical]
TSGene199777
GENETestsZNF626
Target ValidationZNF626
Huge Navigator ZNF626 [HugePedia]
snp3D : Map Gene to Disease199777
BioCentury BCIQZNF626
ClinGenZNF626
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD199777
Chemical/Pharm GKB GenePA134875370
Clinical trialZNF626
Miscellaneous
canSAR (ICR)ZNF626 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF626
EVEXZNF626
GoPubMedZNF626
iHOPZNF626
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:37:34 CET 2017

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