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ZNF626 (zinc finger protein 626)

Identity

Alias (NCBI)-
HGNC (Hugo) ZNF626
LocusID (NCBI) 199777
Atlas_Id 76293
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 20644703 and ends at 20661596 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF626 (19p12)::ADI1 (2p25.3)ZNF626 (19p12)::PHLPP1 (18q21.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF626   30461
Cards
Entrez_Gene (NCBI)ZNF626    zinc finger protein 626
Aliases
GeneCards (Weizmann)ZNF626
Ensembl hg19 (Hinxton)ENSG00000188171 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188171 [Gene_View]  ENSG00000188171 [Sequence]  chr19:20644703-20661596 [Contig_View]  ZNF626 [Vega]
ICGC DataPortalENSG00000188171
TCGA cBioPortalZNF626
AceView (NCBI)ZNF626
Genatlas (Paris)ZNF626
SOURCE (Princeton)ZNF626
Genetics Home Reference (NIH)ZNF626
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF626  -     chr19:20644703-20661596 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF626  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF626 - 19p12 [CytoView hg19]  ZNF626 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000188171
Genome Data Viewer NCBIZNF626 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA525169 AK091329 AK096221 BC007116 BC107803
RefSeq transcript (Entrez)NM_001076675 NM_145297
Consensus coding sequences : CCDS (NCBI)ZNF626
Gene ExpressionZNF626 [ NCBI-GEO ]   ZNF626 [ EBI - ARRAY_EXPRESS ]   ZNF626 [ SEEK ]   ZNF626 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF626 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF626 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)199777
GTEX Portal (Tissue expression)ZNF626
Human Protein AtlasENSG00000188171-ZNF626 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ68DY1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ68DY1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ68DY1
PhosPhoSitePlusQ68DY1
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF626
SuperfamilyQ68DY1
AlphaFold pdb e-kbQ68DY1   
Human Protein Atlas [tissue]ENSG00000188171-ZNF626 [tissue]
HPRD15881
Protein Interaction databases
DIP (DOE-UCLA)Q68DY1
IntAct (EBI)Q68DY1
BioGRIDZNF626
STRING (EMBL)ZNF626
ZODIACZNF626
Ontologies - Pathways
QuickGOQ68DY1
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF626
Atlas of Cancer Signalling NetworkZNF626
Wikipedia pathwaysZNF626
Orthology - Evolution
OrthoDB199777
GeneTree (enSembl)ENSG00000188171
Phylogenetic Trees/Animal Genes : TreeFamZNF626
Homologs : HomoloGeneZNF626
Homology/Alignments : Family Browser (UCSC)ZNF626
Gene fusions - Rearrangements
Fusion : QuiverZNF626
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF626 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF626
dbVarZNF626
ClinVarZNF626
MonarchZNF626
1000_GenomesZNF626 
Exome Variant ServerZNF626
GNOMAD BrowserENSG00000188171
Varsome BrowserZNF626
ACMGZNF626 variants
VarityQ68DY1
Genomic Variants (DGV)ZNF626 [DGVbeta]
DECIPHERZNF626 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF626 
Mutations
ICGC Data PortalZNF626 
TCGA Data PortalZNF626 
Broad Tumor PortalZNF626
OASIS PortalZNF626 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF626  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF626
Mutations and Diseases : HGMDZNF626
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF626
DgiDB (Drug Gene Interaction Database)ZNF626
DoCM (Curated mutations)ZNF626
CIViC (Clinical Interpretations of Variants in Cancer)ZNF626
Cancer3DZNF626
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF626
MedgenZNF626
Genetic Testing Registry ZNF626
NextProtQ68DY1 [Medical]
GENETestsZNF626
Target ValidationZNF626
Huge Navigator ZNF626 [HugePedia]
ClinGenZNF626
Clinical trials, drugs, therapy
MyCancerGenomeZNF626
Protein Interactions : CTDZNF626
Pharm GKB GenePA134875370
PharosQ68DY1
Clinical trialZNF626
Miscellaneous
canSAR (ICR)ZNF626
HarmonizomeZNF626
ARCHS4ZNF626
DataMed IndexZNF626
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF626
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:33:48 CET 2022

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