Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZNF629 (zinc finger protein 629)

Identity

Alias_namesZNF65
zinc finger protein 65
Alias_symbol (synonym)KIAA0326
Other aliasZNF
HGNC (Hugo) ZNF629
LocusID (NCBI) 23361
Atlas_Id 76296
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 30789770 and ends at 30798523 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
WWP2 (16q22.1) / ZNF629 (16p11.2)ZNF629 (16p11.2) / RAB7A (3q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF629   29008
Cards
Entrez_Gene (NCBI)ZNF629  23361  zinc finger protein 629
AliasesZNF; ZNF65
GeneCards (Weizmann)ZNF629
Ensembl hg19 (Hinxton)ENSG00000102870 [Gene_View]  chr16:30789770-30798523 [Contig_View]  ZNF629 [Vega]
Ensembl hg38 (Hinxton)ENSG00000102870 [Gene_View]  chr16:30789770-30798523 [Contig_View]  ZNF629 [Vega]
ICGC DataPortalENSG00000102870
TCGA cBioPortalZNF629
AceView (NCBI)ZNF629
Genatlas (Paris)ZNF629
WikiGenes23361
SOURCE (Princeton)ZNF629
Genetics Home Reference (NIH)ZNF629
Genomic and cartography
GoldenPath hg19 (UCSC)ZNF629  -     chr16:30789770-30798523 -  16p11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ZNF629  -     16p11.2   [Description]    (hg38-Dec_2013)
EnsemblZNF629 - 16p11.2 [CytoView hg19]  ZNF629 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIZNF629 [Mapview hg19]  ZNF629 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB002324 AK026115 BC015676 BC047041 BC063520
RefSeq transcript (Entrez)NM_001080417
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187260 NW_004929400
Consensus coding sequences : CCDS (NCBI)ZNF629
Cluster EST : UnigeneHs.301094 [ NCBI ]
CGAP (NCI)Hs.301094
Alternative Splicing GalleryENSG00000102870
Gene ExpressionZNF629 [ NCBI-GEO ]   ZNF629 [ EBI - ARRAY_EXPRESS ]   ZNF629 [ SEEK ]   ZNF629 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF629 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23361
GTEX Portal (Tissue expression)ZNF629
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UEG4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UEG4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UEG4
Splice isoforms : SwissVarQ9UEG4
PhosPhoSitePlusQ9UEG4
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF629
DMDM Disease mutations23361
Blocks (Seattle)ZNF629
SuperfamilyQ9UEG4
Human Protein AtlasENSG00000102870
Peptide AtlasQ9UEG4
IPIIPI00018411   
Protein Interaction databases
DIP (DOE-UCLA)Q9UEG4
IntAct (EBI)Q9UEG4
FunCoupENSG00000102870
BioGRIDZNF629
STRING (EMBL)ZNF629
ZODIACZNF629
Ontologies - Pathways
QuickGOQ9UEG4
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF629
Atlas of Cancer Signalling NetworkZNF629
Wikipedia pathwaysZNF629
Orthology - Evolution
OrthoDB23361
GeneTree (enSembl)ENSG00000102870
Phylogenetic Trees/Animal Genes : TreeFamZNF629
HOVERGENQ9UEG4
HOGENOMQ9UEG4
Homologs : HomoloGeneZNF629
Homology/Alignments : Family Browser (UCSC)ZNF629
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF629 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF629
dbVarZNF629
ClinVarZNF629
1000_GenomesZNF629 
Exome Variant ServerZNF629
ExAC (Exome Aggregation Consortium)ZNF629 (select the gene name)
Genetic variants : HAPMAP23361
Genomic Variants (DGV)ZNF629 [DGVbeta]
DECIPHER (Syndromes)16:30789770-30798523  ENSG00000102870
CONAN: Copy Number AnalysisZNF629 
Mutations
ICGC Data PortalZNF629 
TCGA Data PortalZNF629 
Broad Tumor PortalZNF629
OASIS PortalZNF629 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF629  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF629
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF629
DgiDB (Drug Gene Interaction Database)ZNF629
DoCM (Curated mutations)ZNF629 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF629 (select a term)
intoGenZNF629
Cancer3DZNF629(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF629
Genetic Testing Registry ZNF629
NextProtQ9UEG4 [Medical]
TSGene23361
GENETestsZNF629
Huge Navigator ZNF629 [HugePedia]
snp3D : Map Gene to Disease23361
BioCentury BCIQZNF629
ClinGenZNF629
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23361
Chemical/Pharm GKB GenePA134930939
Clinical trialZNF629
Miscellaneous
canSAR (ICR)ZNF629 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF629
EVEXZNF629
GoPubMedZNF629
iHOPZNF629
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:53:32 CET 2017

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