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ZNF630 (zinc finger protein 630)

Identity

Alias_symbol (synonym)BC037316
dJ54B20.2
FLJ20573
MGC138344
Other alias
HGNC (Hugo) ZNF630
LocusID (NCBI) 57232
Atlas_Id 76297
Location Xp11.23  [Link to chromosome band Xp11]
Location_base_pair Starts at 48058178 and ends at 48071141 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF630   28855
Cards
Entrez_Gene (NCBI)ZNF630  57232  zinc finger protein 630
AliasesdJ54B20.2
GeneCards (Weizmann)ZNF630
Ensembl hg19 (Hinxton)ENSG00000221994 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221994 [Gene_View]  chrX:48058178-48071141 [Contig_View]  ZNF630 [Vega]
ICGC DataPortalENSG00000221994
TCGA cBioPortalZNF630
AceView (NCBI)ZNF630
Genatlas (Paris)ZNF630
WikiGenes57232
SOURCE (Princeton)ZNF630
Genetics Home Reference (NIH)ZNF630
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF630  -     chrX:48058178-48071141 -  Xp11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF630  -     Xp11.23   [Description]    (hg19-Feb_2009)
EnsemblZNF630 - Xp11.23 [CytoView hg19]  ZNF630 - Xp11.23 [CytoView hg38]
Mapping of homologs : NCBIZNF630 [Mapview hg19]  ZNF630 [Mapview hg38]
OMIM300819   
Gene and transcription
Genbank (Entrez)AK000580 AK307979 BC037316 BC112139 BX116378
RefSeq transcript (Entrez)NM_001037735 NM_001190255 NM_001282201 NM_001282202
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF630
Cluster EST : UnigeneHs.650883 [ NCBI ]
CGAP (NCI)Hs.650883
Alternative Splicing GalleryENSG00000221994
Gene ExpressionZNF630 [ NCBI-GEO ]   ZNF630 [ EBI - ARRAY_EXPRESS ]   ZNF630 [ SEEK ]   ZNF630 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF630 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57232
GTEX Portal (Tissue expression)ZNF630
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2M218   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2M218  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2M218
Splice isoforms : SwissVarQ2M218
PhosPhoSitePlusQ2M218
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF630
DMDM Disease mutations57232
Blocks (Seattle)ZNF630
SuperfamilyQ2M218
Human Protein AtlasENSG00000221994
Peptide AtlasQ2M218
IPIIPI00719191   IPI00896385   IPI00916932   IPI00916787   IPI00917253   
Protein Interaction databases
DIP (DOE-UCLA)Q2M218
IntAct (EBI)Q2M218
FunCoupENSG00000221994
BioGRIDZNF630
STRING (EMBL)ZNF630
ZODIACZNF630
Ontologies - Pathways
QuickGOQ2M218
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF630
Atlas of Cancer Signalling NetworkZNF630
Wikipedia pathwaysZNF630
Orthology - Evolution
OrthoDB57232
GeneTree (enSembl)ENSG00000221994
Phylogenetic Trees/Animal Genes : TreeFamZNF630
HOVERGENQ2M218
HOGENOMQ2M218
Homologs : HomoloGeneZNF630
Homology/Alignments : Family Browser (UCSC)ZNF630
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF630 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF630
dbVarZNF630
ClinVarZNF630
1000_GenomesZNF630 
Exome Variant ServerZNF630
ExAC (Exome Aggregation Consortium)ZNF630 (select the gene name)
Genetic variants : HAPMAP57232
Genomic Variants (DGV)ZNF630 [DGVbeta]
DECIPHERZNF630 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF630 
Mutations
ICGC Data PortalZNF630 
TCGA Data PortalZNF630 
Broad Tumor PortalZNF630
OASIS PortalZNF630 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF630  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF630
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch ZNF630
DgiDB (Drug Gene Interaction Database)ZNF630
DoCM (Curated mutations)ZNF630 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF630 (select a term)
intoGenZNF630
Cancer3DZNF630(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300819   
Orphanet
MedgenZNF630
Genetic Testing Registry ZNF630
NextProtQ2M218 [Medical]
TSGene57232
GENETestsZNF630
Target ValidationZNF630
Huge Navigator ZNF630 [HugePedia]
snp3D : Map Gene to Disease57232
BioCentury BCIQZNF630
ClinGenZNF630
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57232
Chemical/Pharm GKB GenePA134889031
Clinical trialZNF630
Miscellaneous
canSAR (ICR)ZNF630 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF630
EVEXZNF630
GoPubMedZNF630
iHOPZNF630
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:05 CEST 2017

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