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ZNF645 (zinc finger protein 645)

Identity

Alias_symbol (synonym)FLJ25735
HAKAIL
CT138
Other alias
HGNC (Hugo) ZNF645
LocusID (NCBI) 158506
Atlas_Id 76302
Location Xp22.11  [Link to chromosome band Xp22]
Location_base_pair Starts at 22272913 and ends at 22274459 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF645   26371
Cards
Entrez_Gene (NCBI)ZNF645  158506  zinc finger protein 645
AliasesCT138; HAKAIL
GeneCards (Weizmann)ZNF645
Ensembl hg19 (Hinxton)ENSG00000175809 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000175809 [Gene_View]  chrX:22272913-22274459 [Contig_View]  ZNF645 [Vega]
ICGC DataPortalENSG00000175809
TCGA cBioPortalZNF645
AceView (NCBI)ZNF645
Genatlas (Paris)ZNF645
WikiGenes158506
SOURCE (Princeton)ZNF645
Genetics Home Reference (NIH)ZNF645
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF645  -     chrX:22272913-22274459 +  Xp22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF645  -     Xp22.11   [Description]    (hg19-Feb_2009)
EnsemblZNF645 - Xp22.11 [CytoView hg19]  ZNF645 - Xp22.11 [CytoView hg38]
Mapping of homologs : NCBIZNF645 [Mapview hg19]  ZNF645 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098601 BC074910 BC126190 BC126192 BX103567
RefSeq transcript (Entrez)NM_152577
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF645
Cluster EST : UnigeneHs.132485 [ NCBI ]
CGAP (NCI)Hs.132485
Alternative Splicing GalleryENSG00000175809
Gene ExpressionZNF645 [ NCBI-GEO ]   ZNF645 [ EBI - ARRAY_EXPRESS ]   ZNF645 [ SEEK ]   ZNF645 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF645 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)158506
GTEX Portal (Tissue expression)ZNF645
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N7E2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N7E2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N7E2
Splice isoforms : SwissVarQ8N7E2
Catalytic activity : Enzyme2.3.2.27 [ Enzyme-Expasy ]   2.3.2.272.3.2.27 [ IntEnz-EBI ]   2.3.2.27 [ BRENDA ]   2.3.2.27 [ KEGG ]   
PhosPhoSitePlusQ8N7E2
Domaine pattern : Prosite (Expaxy)ZF_RING_1 (PS00518)    ZF_RING_2 (PS50089)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_RING    Znf_RING/FYVE/PHD    Znf_RING_CS   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZNF645
DMDM Disease mutations158506
Blocks (Seattle)ZNF645
SuperfamilyQ8N7E2
Human Protein AtlasENSG00000175809
Peptide AtlasQ8N7E2
HPRD06545
IPIIPI00175201   
Protein Interaction databases
DIP (DOE-UCLA)Q8N7E2
IntAct (EBI)Q8N7E2
FunCoupENSG00000175809
BioGRIDZNF645
STRING (EMBL)ZNF645
ZODIACZNF645
Ontologies - Pathways
QuickGOQ8N7E2
Ontology : AmiGOnucleic acid binding  cytoplasm  zinc ion binding  protein ubiquitination  regulation of cell adhesion  ubiquitin protein ligase activity  
Ontology : EGO-EBInucleic acid binding  cytoplasm  zinc ion binding  protein ubiquitination  regulation of cell adhesion  ubiquitin protein ligase activity  
NDEx NetworkZNF645
Atlas of Cancer Signalling NetworkZNF645
Wikipedia pathwaysZNF645
Orthology - Evolution
OrthoDB158506
GeneTree (enSembl)ENSG00000175809
Phylogenetic Trees/Animal Genes : TreeFamZNF645
HOVERGENQ8N7E2
HOGENOMQ8N7E2
Homologs : HomoloGeneZNF645
Homology/Alignments : Family Browser (UCSC)ZNF645
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF645 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF645
dbVarZNF645
ClinVarZNF645
1000_GenomesZNF645 
Exome Variant ServerZNF645
ExAC (Exome Aggregation Consortium)ZNF645 (select the gene name)
Genetic variants : HAPMAP158506
Genomic Variants (DGV)ZNF645 [DGVbeta]
DECIPHERZNF645 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF645 
Mutations
ICGC Data PortalZNF645 
TCGA Data PortalZNF645 
Broad Tumor PortalZNF645
OASIS PortalZNF645 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF645  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF645
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch ZNF645
DgiDB (Drug Gene Interaction Database)ZNF645
DoCM (Curated mutations)ZNF645 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF645 (select a term)
intoGenZNF645
Cancer3DZNF645(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF645
Genetic Testing Registry ZNF645
NextProtQ8N7E2 [Medical]
TSGene158506
GENETestsZNF645
Huge Navigator ZNF645 [HugePedia]
snp3D : Map Gene to Disease158506
BioCentury BCIQZNF645
ClinGenZNF645
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD158506
Chemical/Pharm GKB GenePA134934025
Clinical trialZNF645
Miscellaneous
canSAR (ICR)ZNF645 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF645
EVEXZNF645
GoPubMedZNF645
iHOPZNF645
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:03:30 CEST 2017

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