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ZNF66 (zinc finger protein 66)

Identity

Alias (NCBI)ZNF66P
HGNC (Hugo) ZNF66
HGNC Alias symbFLJ16537
HGNC Previous nameZNF66P
HGNC Previous namezinc finger protein 66, pseudogene
LocusID (NCBI) 7617
Atlas_Id 80088
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 20776304 and ends at 20809995 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

 

Nomenclature
HGNC (Hugo)ZNF66   13135
Cards
Entrez_Gene (NCBI)ZNF66    zinc finger protein 66
AliasesZNF66P
GeneCards (Weizmann)ZNF66
Ensembl hg19 (Hinxton)ENSG00000160229 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000160229 [Gene_View]  ENSG00000160229 [Sequence]  chr19:20776304-20809995 [Contig_View]  ZNF66 [Vega]
ICGC DataPortalENSG00000160229
TCGA cBioPortalZNF66
AceView (NCBI)ZNF66
Genatlas (Paris)ZNF66
SOURCE (Princeton)ZNF66
Genetics Home Reference (NIH)ZNF66
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF66  -     chr19:20776304-20809995 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF66  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF66 - 19p12 [CytoView hg19]  ZNF66 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000160229
Genome Data Viewer NCBIZNF66 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC067843 DA792668
RefSeq transcript (Entrez)NM_001009883 NM_001355197
Consensus coding sequences : CCDS (NCBI)ZNF66
Gene ExpressionZNF66 [ NCBI-GEO ]   ZNF66 [ EBI - ARRAY_EXPRESS ]   ZNF66 [ SEEK ]   ZNF66 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF66 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF66 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7617
GTEX Portal (Tissue expression)ZNF66
Human Protein AtlasENSG00000160229-ZNF66 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZN08   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZN08  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZN08
PhosPhoSitePlusQ6ZN08
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)    ZINC_PROTEASE (PS00142)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF66
SuperfamilyQ6ZN08
AlphaFold pdb e-kbQ6ZN08   
Human Protein Atlas [tissue]ENSG00000160229-ZNF66 [tissue]
Protein Interaction databases
DIP (DOE-UCLA)Q6ZN08
IntAct (EBI)Q6ZN08
BioGRIDZNF66
STRING (EMBL)ZNF66
ZODIACZNF66
Ontologies - Pathways
QuickGOQ6ZN08
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF66
Atlas of Cancer Signalling NetworkZNF66
Wikipedia pathwaysZNF66
Orthology - Evolution
OrthoDB7617
GeneTree (enSembl)ENSG00000160229
Phylogenetic Trees/Animal Genes : TreeFamZNF66
Homologs : HomoloGeneZNF66
Homology/Alignments : Family Browser (UCSC)ZNF66
Gene fusions - Rearrangements
Fusion : QuiverZNF66
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF66 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF66
dbVarZNF66
ClinVarZNF66
MonarchZNF66
1000_GenomesZNF66 
Exome Variant ServerZNF66
GNOMAD BrowserENSG00000160229
Varsome BrowserZNF66
ACMGZNF66 variants
VarityQ6ZN08
Genomic Variants (DGV)ZNF66 [DGVbeta]
DECIPHERZNF66 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF66 
Mutations
ICGC Data PortalZNF66 
TCGA Data PortalZNF66 
Broad Tumor PortalZNF66
OASIS PortalZNF66 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF66  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF66
Mutations and Diseases : HGMDZNF66
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF66
DgiDB (Drug Gene Interaction Database)ZNF66
DoCM (Curated mutations)ZNF66
CIViC (Clinical Interpretations of Variants in Cancer)ZNF66
Cancer3DZNF66
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF66
MedgenZNF66
Genetic Testing Registry ZNF66
NextProtQ6ZN08 [Medical]
GENETestsZNF66
Target ValidationZNF66
Huge Navigator ZNF66 [HugePedia]
ClinGenZNF66
Clinical trials, drugs, therapy
MyCancerGenomeZNF66
Protein Interactions : CTDZNF66
Pharm GKB GenePA37709
PharosQ6ZN08
Clinical trialZNF66
Miscellaneous
canSAR (ICR)ZNF66
HarmonizomeZNF66
ARCHS4ZNF66
DataMed IndexZNF66
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF66
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 14:00:14 CET 2022

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