Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZNF664-RFLNA (ZNF664-RFLNA readthrough)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100533183
Atlas_Id 79796
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 123973184 and ends at 124316024 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)ZNF664-RFLNA  100533183  ZNF664-RFLNA readthrough
Aliases
GeneCards (Weizmann)ZNF664-RFLNA
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:123973184-124316024 [Contig_View]  ZNF664-RFLNA [Vega]
TCGA cBioPortalZNF664-RFLNA
AceView (NCBI)ZNF664-RFLNA
Genatlas (Paris)ZNF664-RFLNA
WikiGenes100533183
SOURCE (Princeton)ZNF664-RFLNA
Genetics Home Reference (NIH)ZNF664-RFLNA
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF664-RFLNA  -     chr12:123973184-124316024 +  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF664-RFLNA  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblZNF664-RFLNA - 12q24.31 [CytoView hg19]  ZNF664-RFLNA - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIZNF664-RFLNA [Mapview hg19]  ZNF664-RFLNA [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA169732
RefSeq transcript (Entrez)NM_001204299 NM_001347902
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF664-RFLNA
Cluster EST : UnigeneHs.524828 [ NCBI ]
CGAP (NCI)Hs.524828
Gene ExpressionZNF664-RFLNA [ NCBI-GEO ]   ZNF664-RFLNA [ EBI - ARRAY_EXPRESS ]   ZNF664-RFLNA [ SEEK ]   ZNF664-RFLNA [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF664-RFLNA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100533183
GTEX Portal (Tissue expression)ZNF664-RFLNA
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZTI6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZTI6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZTI6
Splice isoforms : SwissVarQ6ZTI6
PhosPhoSitePlusQ6ZTI6
Domains : Interpro (EBI)FAM101   
Domain families : Pfam (Sanger)FAM101 (PF15068)   
Domain families : Pfam (NCBI)pfam15068   
Conserved Domain (NCBI)ZNF664-RFLNA
DMDM Disease mutations100533183
Blocks (Seattle)ZNF664-RFLNA
SuperfamilyQ6ZTI6
Peptide AtlasQ6ZTI6
IPIIPI00783898   IPI00412616   IPI00166446   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZTI6
IntAct (EBI)Q6ZTI6
BioGRIDZNF664-RFLNA
STRING (EMBL)ZNF664-RFLNA
ZODIACZNF664-RFLNA
Ontologies - Pathways
QuickGOQ6ZTI6
Ontology : AmiGOprotein binding  cytoplasm  cytoskeleton  filamin binding  regulation of chondrocyte development  actin filament bundle organization  
Ontology : EGO-EBIprotein binding  cytoplasm  cytoskeleton  filamin binding  regulation of chondrocyte development  actin filament bundle organization  
NDEx NetworkZNF664-RFLNA
Atlas of Cancer Signalling NetworkZNF664-RFLNA
Wikipedia pathwaysZNF664-RFLNA
Orthology - Evolution
OrthoDB100533183
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ6ZTI6
HOGENOMQ6ZTI6
Homologs : HomoloGeneZNF664-RFLNA
Homology/Alignments : Family Browser (UCSC)ZNF664-RFLNA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF664-RFLNA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF664-RFLNA
dbVarZNF664-RFLNA
ClinVarZNF664-RFLNA
1000_GenomesZNF664-RFLNA 
Exome Variant ServerZNF664-RFLNA
ExAC (Exome Aggregation Consortium)ZNF664-RFLNA (select the gene name)
Genetic variants : HAPMAP100533183
Genomic Variants (DGV)ZNF664-RFLNA [DGVbeta]
DECIPHERZNF664-RFLNA [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF664-RFLNA 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF664-RFLNA
DgiDB (Drug Gene Interaction Database)ZNF664-RFLNA
DoCM (Curated mutations)ZNF664-RFLNA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF664-RFLNA (select a term)
intoGenZNF664-RFLNA
Cancer3DZNF664-RFLNA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF664-RFLNA
Genetic Testing Registry ZNF664-RFLNA
NextProtQ6ZTI6 [Medical]
TSGene100533183
GENETestsZNF664-RFLNA
Target ValidationZNF664-RFLNA
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100533183
BioCentury BCIQZNF664-RFLNA
ClinGenZNF664-RFLNA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100533183
Clinical trialZNF664-RFLNA
Miscellaneous
canSAR (ICR)ZNF664-RFLNA (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF664-RFLNA
EVEXZNF664-RFLNA
GoPubMedZNF664-RFLNA
iHOPZNF664-RFLNA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:45:08 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.