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ZNF664 (zinc finger protein 664)

Identity

Alias_namesZNF176
zinc finger protein 176
Alias_symbol (synonym)ZFOC1
DKFZp761B128
Other alias
HGNC (Hugo) ZNF664
LocusID (NCBI) 144348
Atlas_Id 76314
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 123973215 and ends at 124015439 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANK2 (4q25) / ZNF664 (12q24.31)CDH23 (10q22.1) / ZNF664 (12q24.31)CORO1C (12q24.11) / ZNF664 (12q24.31)
FAM69A (1p22.1) / ZNF664 (12q24.31)HLA-C (6p21.33) / ZNF664 (12q24.31)RTL1 (14q32.2) / ZNF664 (12q24.31)
VIM (10p13) / ZNF664 (12q24.31)ZNF664 (12q24.31) / GALNT2 (1q42.13)ZNF664 (12q24.31) / TRIM25 (17q22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF664   25406
Cards
Entrez_Gene (NCBI)ZNF664  144348  zinc finger protein 664
AliasesZFOC1; ZNF176
GeneCards (Weizmann)ZNF664
Ensembl hg19 (Hinxton)ENSG00000179195 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179195 [Gene_View]  chr12:123973215-124015439 [Contig_View]  ZNF664 [Vega]
ICGC DataPortalENSG00000179195
TCGA cBioPortalZNF664
AceView (NCBI)ZNF664
Genatlas (Paris)ZNF664
WikiGenes144348
SOURCE (Princeton)ZNF664
Genetics Home Reference (NIH)ZNF664
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF664  -     chr12:123973215-124015439 +  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF664  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblZNF664 - 12q24.31 [CytoView hg19]  ZNF664 - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIZNF664 [Mapview hg19]  ZNF664 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023009 AK056034 AL834266 AM392806 BC017960
RefSeq transcript (Entrez)NM_001204298 NM_152437
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF664
Cluster EST : UnigeneHs.524828 [ NCBI ]
CGAP (NCI)Hs.524828
Alternative Splicing GalleryENSG00000179195
Gene ExpressionZNF664 [ NCBI-GEO ]   ZNF664 [ EBI - ARRAY_EXPRESS ]   ZNF664 [ SEEK ]   ZNF664 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF664 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)144348
GTEX Portal (Tissue expression)ZNF664
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N3J9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N3J9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N3J9
Splice isoforms : SwissVarQ8N3J9
PhosPhoSitePlusQ8N3J9
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)C2H2_Znf_fam    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF664
DMDM Disease mutations144348
Blocks (Seattle)ZNF664
SuperfamilyQ8N3J9
Human Protein AtlasENSG00000179195
Peptide AtlasQ8N3J9
HPRD15723
IPIIPI00166563   IPI00786843   
Protein Interaction databases
DIP (DOE-UCLA)Q8N3J9
IntAct (EBI)Q8N3J9
FunCoupENSG00000179195
BioGRIDZNF664
STRING (EMBL)ZNF664
ZODIACZNF664
Ontologies - Pathways
QuickGOQ8N3J9
Ontology : AmiGOmolecular_function  DNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  metal ion binding  
Ontology : EGO-EBImolecular_function  DNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  biological_process  metal ion binding  
NDEx NetworkZNF664
Atlas of Cancer Signalling NetworkZNF664
Wikipedia pathwaysZNF664
Orthology - Evolution
OrthoDB144348
GeneTree (enSembl)ENSG00000179195
Phylogenetic Trees/Animal Genes : TreeFamZNF664
HOVERGENQ8N3J9
HOGENOMQ8N3J9
Homologs : HomoloGeneZNF664
Homology/Alignments : Family Browser (UCSC)ZNF664
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF664 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF664
dbVarZNF664
ClinVarZNF664
1000_GenomesZNF664 
Exome Variant ServerZNF664
ExAC (Exome Aggregation Consortium)ZNF664 (select the gene name)
Genetic variants : HAPMAP144348
Genomic Variants (DGV)ZNF664 [DGVbeta]
DECIPHERZNF664 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF664 
Mutations
ICGC Data PortalZNF664 
TCGA Data PortalZNF664 
Broad Tumor PortalZNF664
OASIS PortalZNF664 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF664  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF664
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF664
DgiDB (Drug Gene Interaction Database)ZNF664
DoCM (Curated mutations)ZNF664 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF664 (select a term)
intoGenZNF664
Cancer3DZNF664(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF664
Genetic Testing Registry ZNF664
NextProtQ8N3J9 [Medical]
TSGene144348
GENETestsZNF664
Huge Navigator ZNF664 [HugePedia]
snp3D : Map Gene to Disease144348
BioCentury BCIQZNF664
ClinGenZNF664
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD144348
Chemical/Pharm GKB GenePA37547
Clinical trialZNF664
Miscellaneous
canSAR (ICR)ZNF664 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF664
EVEXZNF664
GoPubMedZNF664
iHOPZNF664
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:03:33 CEST 2017

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