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ZNF665 (zinc finger protein 665)

Identity

Alias_symbol (synonym)FLJ14345
Other aliasZFP160L
HGNC (Hugo) ZNF665
LocusID (NCBI) 79788
Atlas_Id 76316
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53163299 and ends at 53193366 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF665   25885
Cards
Entrez_Gene (NCBI)ZNF665  79788  zinc finger protein 665
AliasesZFP160L
GeneCards (Weizmann)ZNF665
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:53163299-53193366 [Contig_View]  ZNF665 [Vega]
TCGA cBioPortalZNF665
AceView (NCBI)ZNF665
Genatlas (Paris)ZNF665
WikiGenes79788
SOURCE (Princeton)ZNF665
Genetics Home Reference (NIH)ZNF665
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF665  -     chr19:53163299-53193366 -  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF665  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblZNF665 - 19q13.42 [CytoView hg19]  ZNF665 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIZNF665 [Mapview hg19]  ZNF665 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096261 AK291403 AL832507 DA696332
RefSeq transcript (Entrez)NM_024733
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF665
Cluster EST : UnigeneHs.745230 [ NCBI ]
CGAP (NCI)Hs.745230
Gene ExpressionZNF665 [ NCBI-GEO ]   ZNF665 [ EBI - ARRAY_EXPRESS ]   ZNF665 [ SEEK ]   ZNF665 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF665 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79788
GTEX Portal (Tissue expression)ZNF665
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H7R5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H7R5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H7R5
Splice isoforms : SwissVarQ9H7R5
PhosPhoSitePlusQ9H7R5
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF665
DMDM Disease mutations79788
Blocks (Seattle)ZNF665
SuperfamilyQ9H7R5
Peptide AtlasQ9H7R5
HPRD07856
IPIIPI00977267   IPI00156804   
Protein Interaction databases
DIP (DOE-UCLA)Q9H7R5
IntAct (EBI)Q9H7R5
BioGRIDZNF665
STRING (EMBL)ZNF665
ZODIACZNF665
Ontologies - Pathways
QuickGOQ9H7R5
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF665
Atlas of Cancer Signalling NetworkZNF665
Wikipedia pathwaysZNF665
Orthology - Evolution
OrthoDB79788
Phylogenetic Trees/Animal Genes : TreeFamZNF665
HOVERGENQ9H7R5
HOGENOMQ9H7R5
Homologs : HomoloGeneZNF665
Homology/Alignments : Family Browser (UCSC)ZNF665
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF665 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF665
dbVarZNF665
ClinVarZNF665
1000_GenomesZNF665 
Exome Variant ServerZNF665
ExAC (Exome Aggregation Consortium)ZNF665 (select the gene name)
Genetic variants : HAPMAP79788
Genomic Variants (DGV)ZNF665 [DGVbeta]
DECIPHERZNF665 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF665 
Mutations
ICGC Data PortalZNF665 
TCGA Data PortalZNF665 
Broad Tumor PortalZNF665
OASIS PortalZNF665 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF665  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF665
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF665
DgiDB (Drug Gene Interaction Database)ZNF665
DoCM (Curated mutations)ZNF665 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF665 (select a term)
intoGenZNF665
Cancer3DZNF665(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF665
Genetic Testing Registry ZNF665
NextProtQ9H7R5 [Medical]
TSGene79788
GENETestsZNF665
Target ValidationZNF665
Huge Navigator ZNF665 [HugePedia]
snp3D : Map Gene to Disease79788
BioCentury BCIQZNF665
ClinGenZNF665
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79788
Chemical/Pharm GKB GenePA142670513
Clinical trialZNF665
Miscellaneous
canSAR (ICR)ZNF665 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF665
EVEXZNF665
GoPubMedZNF665
iHOPZNF665
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:45:08 CEST 2017

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