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ZNF667 (zinc finger protein 667)

Identity

Alias_symbol (synonym)FLJ14011
Other aliasMIPU1
HGNC (Hugo) ZNF667
LocusID (NCBI) 63934
Atlas_Id 76317
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 56439324 and ends at 56477401 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
LYZ (12q15) / ZNF667 (19q13.43)UBE3C (7q36.3) / ZNF667 (19q13.43)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF667   28854
Cards
Entrez_Gene (NCBI)ZNF667  63934  zinc finger protein 667
AliasesMIPU1
GeneCards (Weizmann)ZNF667
Ensembl hg19 (Hinxton)ENSG00000198046 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198046 [Gene_View]  chr19:56439324-56477401 [Contig_View]  ZNF667 [Vega]
ICGC DataPortalENSG00000198046
TCGA cBioPortalZNF667
AceView (NCBI)ZNF667
Genatlas (Paris)ZNF667
WikiGenes63934
SOURCE (Princeton)ZNF667
Genetics Home Reference (NIH)ZNF667
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF667  -     chr19:56439324-56477401 -  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF667  -     19q13.43   [Description]    (hg19-Feb_2009)
EnsemblZNF667 - 19q13.43 [CytoView hg19]  ZNF667 - 19q13.43 [CytoView hg38]
Mapping of homologs : NCBIZNF667 [Mapview hg19]  ZNF667 [Mapview hg38]
OMIM611024   
Gene and transcription
Genbank (Entrez)AK024073 AK056508 AK096513 AK126957 AK127426
RefSeq transcript (Entrez)NM_001321355 NM_001321356 NM_022103
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF667
Cluster EST : UnigeneHs.676605 [ NCBI ]
CGAP (NCI)Hs.676605
Alternative Splicing GalleryENSG00000198046
Gene ExpressionZNF667 [ NCBI-GEO ]   ZNF667 [ EBI - ARRAY_EXPRESS ]   ZNF667 [ SEEK ]   ZNF667 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF667 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)63934
GTEX Portal (Tissue expression)ZNF667
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5HYK9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5HYK9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5HYK9
Splice isoforms : SwissVarQ5HYK9
PhosPhoSitePlusQ5HYK9
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_11 (PF16622)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam16622    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF667
DMDM Disease mutations63934
Blocks (Seattle)ZNF667
SuperfamilyQ5HYK9
Human Protein AtlasENSG00000198046
Peptide AtlasQ5HYK9
HPRD08592
IPIIPI00413718   IPI00183349   IPI00479892   IPI00939661   
Protein Interaction databases
DIP (DOE-UCLA)Q5HYK9
IntAct (EBI)Q5HYK9
FunCoupENSG00000198046
BioGRIDZNF667
STRING (EMBL)ZNF667
ZODIACZNF667
Ontologies - Pathways
QuickGOQ5HYK9
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF667
Atlas of Cancer Signalling NetworkZNF667
Wikipedia pathwaysZNF667
Orthology - Evolution
OrthoDB63934
GeneTree (enSembl)ENSG00000198046
Phylogenetic Trees/Animal Genes : TreeFamZNF667
HOVERGENQ5HYK9
HOGENOMQ5HYK9
Homologs : HomoloGeneZNF667
Homology/Alignments : Family Browser (UCSC)ZNF667
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF667 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF667
dbVarZNF667
ClinVarZNF667
1000_GenomesZNF667 
Exome Variant ServerZNF667
ExAC (Exome Aggregation Consortium)ZNF667 (select the gene name)
Genetic variants : HAPMAP63934
Genomic Variants (DGV)ZNF667 [DGVbeta]
DECIPHERZNF667 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF667 
Mutations
ICGC Data PortalZNF667 
TCGA Data PortalZNF667 
Broad Tumor PortalZNF667
OASIS PortalZNF667 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF667  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF667
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF667
DgiDB (Drug Gene Interaction Database)ZNF667
DoCM (Curated mutations)ZNF667 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF667 (select a term)
intoGenZNF667
Cancer3DZNF667(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611024   
Orphanet
MedgenZNF667
Genetic Testing Registry ZNF667
NextProtQ5HYK9 [Medical]
TSGene63934
GENETestsZNF667
Target ValidationZNF667
Huge Navigator ZNF667 [HugePedia]
snp3D : Map Gene to Disease63934
BioCentury BCIQZNF667
ClinGenZNF667
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD63934
Chemical/Pharm GKB GenePA142670514
Clinical trialZNF667
Miscellaneous
canSAR (ICR)ZNF667 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF667
EVEXZNF667
GoPubMedZNF667
iHOPZNF667
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:51:01 CEST 2017

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