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ZNF674 (zinc finger protein 674)

Identity

Alias_namesMRX92
Alias_symbol (synonym)ZNF673B
Other alias
HGNC (Hugo) ZNF674
LocusID (NCBI) 641339
Atlas_Id 76323
Location Xp11.3  [Link to chromosome band Xp11]
Location_base_pair Starts at 46497725 and ends at 46545457 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KDM6A (Xp11.3) / ZNF674 (Xp11.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF674   17625
Cards
Entrez_Gene (NCBI)ZNF674  641339  zinc finger protein 674
AliasesMRX92; ZNF673B
GeneCards (Weizmann)ZNF674
Ensembl hg19 (Hinxton)ENSG00000251192 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251192 [Gene_View]  chrX:46497725-46545457 [Contig_View]  ZNF674 [Vega]
ICGC DataPortalENSG00000251192
TCGA cBioPortalZNF674
AceView (NCBI)ZNF674
Genatlas (Paris)ZNF674
WikiGenes641339
SOURCE (Princeton)ZNF674
Genetics Home Reference (NIH)ZNF674
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF674  -     chrX:46497725-46545457 -  Xp11.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF674  -     Xp11.3   [Description]    (hg19-Feb_2009)
EnsemblZNF674 - Xp11.3 [CytoView hg19]  ZNF674 - Xp11.3 [CytoView hg38]
Mapping of homologs : NCBIZNF674 [Mapview hg19]  ZNF674 [Mapview hg38]
OMIM300573   
Gene and transcription
Genbank (Entrez)AK295054 AK308986 AW173662 AY971607 BC156257
RefSeq transcript (Entrez)NM_001039891 NM_001146291 NM_001190417
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF674
Cluster EST : UnigeneHs.636105 [ NCBI ]
CGAP (NCI)Hs.636105
Alternative Splicing GalleryENSG00000251192
Gene ExpressionZNF674 [ NCBI-GEO ]   ZNF674 [ EBI - ARRAY_EXPRESS ]   ZNF674 [ SEEK ]   ZNF674 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF674 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)641339
GTEX Portal (Tissue expression)ZNF674
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ2M3X9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ2M3X9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ2M3X9
Splice isoforms : SwissVarQ2M3X9
PhosPhoSitePlusQ2M3X9
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF674
DMDM Disease mutations641339
Blocks (Seattle)ZNF674
SuperfamilyQ2M3X9
Human Protein AtlasENSG00000251192
Peptide AtlasQ2M3X9
IPIIPI00096295   IPI00985471   IPI00929226   IPI00973803   
Protein Interaction databases
DIP (DOE-UCLA)Q2M3X9
IntAct (EBI)Q2M3X9
FunCoupENSG00000251192
BioGRIDZNF674
STRING (EMBL)ZNF674
ZODIACZNF674
Ontologies - Pathways
QuickGOQ2M3X9
Ontology : AmiGODNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF674
Atlas of Cancer Signalling NetworkZNF674
Wikipedia pathwaysZNF674
Orthology - Evolution
OrthoDB641339
GeneTree (enSembl)ENSG00000251192
Phylogenetic Trees/Animal Genes : TreeFamZNF674
HOVERGENQ2M3X9
HOGENOMQ2M3X9
Homologs : HomoloGeneZNF674
Homology/Alignments : Family Browser (UCSC)ZNF674
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF674 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF674
dbVarZNF674
ClinVarZNF674
1000_GenomesZNF674 
Exome Variant ServerZNF674
ExAC (Exome Aggregation Consortium)ZNF674 (select the gene name)
Genetic variants : HAPMAP641339
Genomic Variants (DGV)ZNF674 [DGVbeta]
DECIPHERZNF674 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF674 
Mutations
ICGC Data PortalZNF674 
TCGA Data PortalZNF674 
Broad Tumor PortalZNF674
OASIS PortalZNF674 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF674
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF674
DgiDB (Drug Gene Interaction Database)ZNF674
DoCM (Curated mutations)ZNF674 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF674 (select a term)
intoGenZNF674
Cancer3DZNF674(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300573   
Orphanet
MedgenZNF674
Genetic Testing Registry ZNF674
NextProtQ2M3X9 [Medical]
TSGene641339
GENETestsZNF674
Target ValidationZNF674
Huge Navigator ZNF674 [HugePedia]
snp3D : Map Gene to Disease641339
BioCentury BCIQZNF674
ClinGenZNF674
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD641339
Chemical/Pharm GKB GenePA142670475
Clinical trialZNF674
Miscellaneous
canSAR (ICR)ZNF674 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF674
EVEXZNF674
GoPubMedZNF674
iHOPZNF674
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:51:02 CEST 2017

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