Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZNF676 (zinc finger protein 676)

Identity

Alias (NCBI)-
HGNC (Hugo) ZNF676
LocusID (NCBI) 163223
Atlas_Id 76325
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 22179089 and ends at 22196951 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF676   20429
Cards
Entrez_Gene (NCBI)ZNF676    zinc finger protein 676
Aliases
GeneCards (Weizmann)ZNF676
Ensembl hg19 (Hinxton)ENSG00000196109 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196109 [Gene_View]  ENSG00000196109 [Sequence]  chr19:22179089-22196951 [Contig_View]  ZNF676 [Vega]
ICGC DataPortalENSG00000196109
TCGA cBioPortalZNF676
AceView (NCBI)ZNF676
Genatlas (Paris)ZNF676
SOURCE (Princeton)ZNF676
Genetics Home Reference (NIH)ZNF676
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF676  -     chr19:22179089-22196951 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF676  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF676 - 19p12 [CytoView hg19]  ZNF676 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000196109
Genome Data Viewer NCBIZNF676 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK097798 BX281304
RefSeq transcript (Entrez)NM_001001411
Consensus coding sequences : CCDS (NCBI)ZNF676
Gene ExpressionZNF676 [ NCBI-GEO ]   ZNF676 [ EBI - ARRAY_EXPRESS ]   ZNF676 [ SEEK ]   ZNF676 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF676 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF676 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)163223
GTEX Portal (Tissue expression)ZNF676
Human Protein AtlasENSG00000196109-ZNF676 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N7Q3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N7Q3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N7Q3
PhosPhoSitePlusQ8N7Q3
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam00096   
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF676
SuperfamilyQ8N7Q3
AlphaFold pdb e-kbQ8N7Q3   
Human Protein Atlas [tissue]ENSG00000196109-ZNF676 [tissue]
HPRD17313
Protein Interaction databases
DIP (DOE-UCLA)Q8N7Q3
IntAct (EBI)Q8N7Q3
BioGRIDZNF676
STRING (EMBL)ZNF676
ZODIACZNF676
Ontologies - Pathways
QuickGOQ8N7Q3
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription, DNA-templated  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF676
Atlas of Cancer Signalling NetworkZNF676
Wikipedia pathwaysZNF676
Orthology - Evolution
OrthoDB163223
GeneTree (enSembl)ENSG00000196109
Phylogenetic Trees/Animal Genes : TreeFamZNF676
Homologs : HomoloGeneZNF676
Homology/Alignments : Family Browser (UCSC)ZNF676
Gene fusions - Rearrangements
Fusion : QuiverZNF676
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF676 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF676
dbVarZNF676
ClinVarZNF676
MonarchZNF676
1000_GenomesZNF676 
Exome Variant ServerZNF676
GNOMAD BrowserENSG00000196109
Varsome BrowserZNF676
ACMGZNF676 variants
VarityQ8N7Q3
Genomic Variants (DGV)ZNF676 [DGVbeta]
DECIPHERZNF676 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF676 
Mutations
ICGC Data PortalZNF676 
TCGA Data PortalZNF676 
Broad Tumor PortalZNF676
OASIS PortalZNF676 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF676  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF676
Mutations and Diseases : HGMDZNF676
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF676
DgiDB (Drug Gene Interaction Database)ZNF676
DoCM (Curated mutations)ZNF676
CIViC (Clinical Interpretations of Variants in Cancer)ZNF676
Cancer3DZNF676
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF676
MedgenZNF676
Genetic Testing Registry ZNF676
NextProtQ8N7Q3 [Medical]
GENETestsZNF676
Target ValidationZNF676
Huge Navigator ZNF676 [HugePedia]
ClinGenZNF676
Clinical trials, drugs, therapy
MyCancerGenomeZNF676
Protein Interactions : CTDZNF676
Pharm GKB GenePA142670477
PharosQ8N7Q3
Clinical trialZNF676
Miscellaneous
canSAR (ICR)ZNF676
HarmonizomeZNF676
ARCHS4ZNF676
DataMed IndexZNF676
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF676
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 14:00:17 CET 2022

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