Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZNF681 (zinc finger protein 681)

Identity

Alias (NCBI)-
HGNC (Hugo) ZNF681
HGNC Alias symbFLJ31526
HGNC Alias namehypothetical protein FLJ31526
LocusID (NCBI) 148213
Atlas_Id 76330
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 23739195 and ends at 23758891 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)ZNF681   26457
Cards
Entrez_Gene (NCBI)ZNF681    zinc finger protein 681
Aliases
GeneCards (Weizmann)ZNF681
Ensembl hg19 (Hinxton)ENSG00000196172 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196172 [Gene_View]  ENSG00000196172 [Sequence]  chr19:23739195-23758891 [Contig_View]  ZNF681 [Vega]
ICGC DataPortalENSG00000196172
TCGA cBioPortalZNF681
AceView (NCBI)ZNF681
Genatlas (Paris)ZNF681
SOURCE (Princeton)ZNF681
Genetics Home Reference (NIH)ZNF681
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF681  -     chr19:23739195-23758891 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF681  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF681 - 19p12 [CytoView hg19]  ZNF681 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000196172
Genome Data Viewer NCBIZNF681 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK056088 AK122869 BC062216 BC082233 BC136346
RefSeq transcript (Entrez)NM_138286
Consensus coding sequences : CCDS (NCBI)ZNF681
Gene ExpressionZNF681 [ NCBI-GEO ]   ZNF681 [ EBI - ARRAY_EXPRESS ]   ZNF681 [ SEEK ]   ZNF681 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF681 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF681 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)148213
GTEX Portal (Tissue expression)ZNF681
Human Protein AtlasENSG00000196172-ZNF681 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96N22   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96N22  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96N22
PhosPhoSitePlusQ96N22
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF681
SuperfamilyQ96N22
AlphaFold pdb e-kbQ96N22   
Human Protein Atlas [tissue]ENSG00000196172-ZNF681 [tissue]
HPRD08102
Protein Interaction databases
DIP (DOE-UCLA)Q96N22
IntAct (EBI)Q96N22
BioGRIDZNF681
STRING (EMBL)ZNF681
ZODIACZNF681
Ontologies - Pathways
QuickGOQ96N22
Ontology : AmiGORNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIRNA polymerase II cis-regulatory region sequence-specific DNA binding  DNA-binding transcription factor activity, RNA polymerase II-specific  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF681
Atlas of Cancer Signalling NetworkZNF681
Wikipedia pathwaysZNF681
Orthology - Evolution
OrthoDB148213
GeneTree (enSembl)ENSG00000196172
Phylogenetic Trees/Animal Genes : TreeFamZNF681
Homologs : HomoloGeneZNF681
Homology/Alignments : Family Browser (UCSC)ZNF681
Gene fusions - Rearrangements
Fusion : QuiverZNF681
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF681 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF681
dbVarZNF681
ClinVarZNF681
MonarchZNF681
1000_GenomesZNF681 
Exome Variant ServerZNF681
GNOMAD BrowserENSG00000196172
Varsome BrowserZNF681
ACMGZNF681 variants
VarityQ96N22
Genomic Variants (DGV)ZNF681 [DGVbeta]
DECIPHERZNF681 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF681 
Mutations
ICGC Data PortalZNF681 
TCGA Data PortalZNF681 
Broad Tumor PortalZNF681
OASIS PortalZNF681 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF681  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF681
Mutations and Diseases : HGMDZNF681
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaZNF681
DgiDB (Drug Gene Interaction Database)ZNF681
DoCM (Curated mutations)ZNF681
CIViC (Clinical Interpretations of Variants in Cancer)ZNF681
Cancer3DZNF681
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF681
MedgenZNF681
Genetic Testing Registry ZNF681
NextProtQ96N22 [Medical]
GENETestsZNF681
Target ValidationZNF681
Huge Navigator ZNF681 [HugePedia]
ClinGenZNF681
Clinical trials, drugs, therapy
MyCancerGenomeZNF681
Protein Interactions : CTDZNF681
Pharm GKB GenePA142670482
PharosQ96N22
Clinical trialZNF681
Miscellaneous
canSAR (ICR)ZNF681
HarmonizomeZNF681
ARCHS4ZNF681
DataMed IndexZNF681
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXZNF681
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:33:54 CET 2022

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