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ZNF681 (zinc finger protein 681)

Identity

Alias_symbol (synonym)FLJ31526
Other alias-
HGNC (Hugo) ZNF681
LocusID (NCBI) 148213
Atlas_Id 76330
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 23739195 and ends at 23758891 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF681   26457
Cards
Entrez_Gene (NCBI)ZNF681  148213  zinc finger protein 681
Aliases
GeneCards (Weizmann)ZNF681
Ensembl hg19 (Hinxton)ENSG00000196172 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196172 [Gene_View]  chr19:23739195-23758891 [Contig_View]  ZNF681 [Vega]
ICGC DataPortalENSG00000196172
TCGA cBioPortalZNF681
AceView (NCBI)ZNF681
Genatlas (Paris)ZNF681
WikiGenes148213
SOURCE (Princeton)ZNF681
Genetics Home Reference (NIH)ZNF681
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF681  -     chr19:23739195-23758891 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF681  -     19p12   [Description]    (hg19-Feb_2009)
EnsemblZNF681 - 19p12 [CytoView hg19]  ZNF681 - 19p12 [CytoView hg38]
Mapping of homologs : NCBIZNF681 [Mapview hg19]  ZNF681 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK056088 AK122869 BC062216 BC082233 BC136346
RefSeq transcript (Entrez)NM_138286
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF681
Cluster EST : UnigeneHs.735840 [ NCBI ]
CGAP (NCI)Hs.735840
Alternative Splicing GalleryENSG00000196172
Gene ExpressionZNF681 [ NCBI-GEO ]   ZNF681 [ EBI - ARRAY_EXPRESS ]   ZNF681 [ SEEK ]   ZNF681 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF681 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)148213
GTEX Portal (Tissue expression)ZNF681
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96N22   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96N22  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96N22
Splice isoforms : SwissVarQ96N22
PhosPhoSitePlusQ96N22
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)    zf-C2H2_6 (PF13912)   
Domain families : Pfam (NCBI)pfam01352    pfam00096    pfam13912   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF681
DMDM Disease mutations148213
Blocks (Seattle)ZNF681
SuperfamilyQ96N22
Human Protein AtlasENSG00000196172
Peptide AtlasQ96N22
HPRD08102
IPIIPI00794144   IPI00043330   IPI00985463   
Protein Interaction databases
DIP (DOE-UCLA)Q96N22
IntAct (EBI)Q96N22
FunCoupENSG00000196172
BioGRIDZNF681
STRING (EMBL)ZNF681
ZODIACZNF681
Ontologies - Pathways
QuickGOQ96N22
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF681
Atlas of Cancer Signalling NetworkZNF681
Wikipedia pathwaysZNF681
Orthology - Evolution
OrthoDB148213
GeneTree (enSembl)ENSG00000196172
Phylogenetic Trees/Animal Genes : TreeFamZNF681
HOVERGENQ96N22
HOGENOMQ96N22
Homologs : HomoloGeneZNF681
Homology/Alignments : Family Browser (UCSC)ZNF681
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF681 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF681
dbVarZNF681
ClinVarZNF681
1000_GenomesZNF681 
Exome Variant ServerZNF681
ExAC (Exome Aggregation Consortium)ZNF681 (select the gene name)
Genetic variants : HAPMAP148213
Genomic Variants (DGV)ZNF681 [DGVbeta]
DECIPHERZNF681 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF681 
Mutations
ICGC Data PortalZNF681 
TCGA Data PortalZNF681 
Broad Tumor PortalZNF681
OASIS PortalZNF681 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF681  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDZNF681
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF681
DgiDB (Drug Gene Interaction Database)ZNF681
DoCM (Curated mutations)ZNF681 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF681 (select a term)
intoGenZNF681
Cancer3DZNF681(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenZNF681
Genetic Testing Registry ZNF681
NextProtQ96N22 [Medical]
TSGene148213
GENETestsZNF681
Huge Navigator ZNF681 [HugePedia]
snp3D : Map Gene to Disease148213
BioCentury BCIQZNF681
ClinGenZNF681
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD148213
Chemical/Pharm GKB GenePA142670482
Clinical trialZNF681
Miscellaneous
canSAR (ICR)ZNF681 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF681
EVEXZNF681
GoPubMedZNF681
iHOPZNF681
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:03:36 CEST 2017

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